Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.21□□□□□ -0.45
SftpbP50405 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SftpbP50405 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
SftpbP50405 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
SftpbP50405 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SftpbP50405 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.21□□□□□ -0.45
SftpbP50405 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SftpbP50405 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.21□□□□□ -0.45
SftpbP50405 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
SftpbP50405 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SftpbP50405 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.21□□□□□ -0.45
SftpbP50405 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
SftpbP50405 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SftpbP50405 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SftpbP50405 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.21□□□□□ -0.46
SftpbP50405 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SftpbP50405 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SftpbP50405 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
SftpbP50405 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SftpbP50405 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SftpbP50405 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
SftpbP50405 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SftpbP50405 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SftpbP50405 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SftpbP50405 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SftpbP50405 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SftpbP50405 Gm23931-201ENSMUST00000103842 109 ntBASIC12.2□□□□□ -0.46
SftpbP50405 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.2□□□□□ -0.46
SftpbP50405 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SftpbP50405 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SftpbP50405 Gm13829-201ENSMUST00000119600 138 ntBASIC12.2□□□□□ -0.46
SftpbP50405 Gm14832-201ENSMUST00000121289 322 ntBASIC12.2□□□□□ -0.46
SftpbP50405 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.2□□□□□ -0.46
SftpbP50405 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SftpbP50405 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.2□□□□□ -0.46
SftpbP50405 Gm24845-201ENSMUST00000158034 109 ntBASIC12.2□□□□□ -0.46
SftpbP50405 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
SftpbP50405 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.2□□□□□ -0.46
SftpbP50405 Gm43133-201ENSMUST00000197472 463 ntBASIC12.2□□□□□ -0.46
SftpbP50405 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
SftpbP50405 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SftpbP50405 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.2□□□□□ -0.46
SftpbP50405 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.2□□□□□ -0.46
SftpbP50405 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.2□□□□□ -0.46
SftpbP50405 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
SftpbP50405 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SftpbP50405 Gm9996-201ENSMUST00000070359 913 ntBASIC12.2□□□□□ -0.46
SftpbP50405 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SftpbP50405 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SftpbP50405 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
SftpbP50405 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.2□□□□□ -0.46
SftpbP50405 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SftpbP50405 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SftpbP50405 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
SftpbP50405 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.2□□□□□ -0.46
SftpbP50405 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.2□□□□□ -0.46
SftpbP50405 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SftpbP50405 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.2□□□□□ -0.46
SftpbP50405 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SftpbP50405 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SftpbP50405 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.2□□□□□ -0.46
SftpbP50405 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
SftpbP50405 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SftpbP50405 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SftpbP50405 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SftpbP50405 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
SftpbP50405 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SftpbP50405 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SftpbP50405 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SftpbP50405 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.19□□□□□ -0.46
SftpbP50405 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.19□□□□□ -0.46
SftpbP50405 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.19□□□□□ -0.46
SftpbP50405 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.19□□□□□ -0.46
SftpbP50405 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SftpbP50405 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SftpbP50405 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.19□□□□□ -0.46
SftpbP50405 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.19□□□□□ -0.46
SftpbP50405 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SftpbP50405 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SftpbP50405 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SftpbP50405 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SftpbP50405 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SftpbP50405 Gm14247-201ENSMUST00000120950 237 ntBASIC12.19□□□□□ -0.46
SftpbP50405 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.19□□□□□ -0.46
SftpbP50405 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SftpbP50405 Mir1982-201ENSMUST00000157368 74 ntBASIC12.19□□□□□ -0.46
SftpbP50405 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
SftpbP50405 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.19□□□□□ -0.46
SftpbP50405 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SftpbP50405 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SftpbP50405 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
SftpbP50405 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SftpbP50405 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SftpbP50405 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.19□□□□□ -0.46
SftpbP50405 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SftpbP50405 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
SftpbP50405 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
SftpbP50405 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SftpbP50405 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SftpbP50405 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms