Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Gm12502-201ENSMUST00000120197 444 ntBASIC10.52□□□□□ -0.73
GdnfP48540 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
GdnfP48540 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.52□□□□□ -0.73
GdnfP48540 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.52□□□□□ -0.73
GdnfP48540 Snora78-201ENSMUST00000158630 128 ntBASIC10.52□□□□□ -0.73
GdnfP48540 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
GdnfP48540 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC10.52□□□□□ -0.73
GdnfP48540 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC10.52□□□□□ -0.73
GdnfP48540 Gm8738-201ENSMUST00000172606 329 ntBASIC10.52□□□□□ -0.73
GdnfP48540 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC10.52□□□□□ -0.73
GdnfP48540 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
GdnfP48540 Gm5370-201ENSMUST00000187187 574 ntBASIC10.52□□□□□ -0.73
GdnfP48540 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
GdnfP48540 Gm44953-201ENSMUST00000208745 1286 ntBASIC10.52□□□□□ -0.73
GdnfP48540 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
GdnfP48540 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
GdnfP48540 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
GdnfP48540 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
GdnfP48540 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
GdnfP48540 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
GdnfP48540 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
GdnfP48540 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
GdnfP48540 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
GdnfP48540 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.52□□□□□ -0.73
GdnfP48540 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
GdnfP48540 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.52□□□□□ -0.73
GdnfP48540 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
GdnfP48540 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
GdnfP48540 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.52□□□□□ -0.73
GdnfP48540 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
GdnfP48540 Gm42651-201ENSMUST00000199851 1339 ntBASIC10.52□□□□□ -0.73
GdnfP48540 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
GdnfP48540 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
GdnfP48540 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
GdnfP48540 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.52□□□□□ -0.73
GdnfP48540 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
GdnfP48540 Gm14667-201ENSMUST00000119448 1350 ntBASIC10.52□□□□□ -0.73
GdnfP48540 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.52□□□□□ -0.73
GdnfP48540 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
GdnfP48540 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.51□□□□□ -0.73
GdnfP48540 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
GdnfP48540 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
GdnfP48540 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
GdnfP48540 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
GdnfP48540 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
GdnfP48540 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
GdnfP48540 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
GdnfP48540 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
GdnfP48540 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
GdnfP48540 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
GdnfP48540 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
GdnfP48540 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.51□□□□□ -0.73
GdnfP48540 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
GdnfP48540 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
GdnfP48540 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
GdnfP48540 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
GdnfP48540 Gm5187-201ENSMUST00000117317 991 ntBASIC10.51□□□□□ -0.73
GdnfP48540 Gm12957-201ENSMUST00000117835 377 ntBASIC10.51□□□□□ -0.73
GdnfP48540 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
GdnfP48540 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC10.51□□□□□ -0.73
GdnfP48540 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC10.51□□□□□ -0.73
GdnfP48540 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.51□□□□□ -0.73
GdnfP48540 Gm37008-201ENSMUST00000195712 319 ntBASIC10.51□□□□□ -0.73
GdnfP48540 Gm19080-201ENSMUST00000196082 550 ntBASIC10.51□□□□□ -0.73
GdnfP48540 Gm18584-201ENSMUST00000203098 964 ntBASIC10.51□□□□□ -0.73
GdnfP48540 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
GdnfP48540 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.51□□□□□ -0.73
GdnfP48540 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.51□□□□□ -0.73
GdnfP48540 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.51□□□□□ -0.73
GdnfP48540 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC10.51□□□□□ -0.73
GdnfP48540 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC10.51□□□□□ -0.73
GdnfP48540 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
GdnfP48540 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
GdnfP48540 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.51□□□□□ -0.73
GdnfP48540 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
GdnfP48540 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
GdnfP48540 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
GdnfP48540 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
GdnfP48540 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
GdnfP48540 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
GdnfP48540 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.51□□□□□ -0.73
GdnfP48540 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
GdnfP48540 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
GdnfP48540 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.51□□□□□ -0.73
GdnfP48540 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
GdnfP48540 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.51□□□□□ -0.73
GdnfP48540 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
GdnfP48540 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
GdnfP48540 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
GdnfP48540 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
GdnfP48540 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
GdnfP48540 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
GdnfP48540 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
GdnfP48540 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
GdnfP48540 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
GdnfP48540 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
GdnfP48540 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.5□□□□□ -0.73
GdnfP48540 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
GdnfP48540 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
GdnfP48540 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms