Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.49□□□□□ -0.57
Prox1P48437 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.49□□□□□ -0.57
Prox1P48437 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Prox1P48437 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Prox1P48437 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prox1P48437 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prox1P48437 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Prox1P48437 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.48□□□□□ -0.57
Prox1P48437 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prox1P48437 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.48□□□□□ -0.57
Prox1P48437 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prox1P48437 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Prox1P48437 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Prox1P48437 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prox1P48437 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.48□□□□□ -0.57
Prox1P48437 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Prox1P48437 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prox1P48437 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prox1P48437 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Prox1P48437 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prox1P48437 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prox1P48437 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prox1P48437 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prox1P48437 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prox1P48437 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Prox1P48437 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Prox1P48437 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prox1P48437 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Prox1P48437 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.48□□□□□ -0.57
Prox1P48437 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Prox1P48437 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.48□□□□□ -0.57
Prox1P48437 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.48□□□□□ -0.57
Prox1P48437 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.48□□□□□ -0.57
Prox1P48437 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Prox1P48437 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.48□□□□□ -0.57
Prox1P48437 Gm7029-201ENSMUST00000173226 450 ntBASIC11.48□□□□□ -0.57
Prox1P48437 Gm29649-201ENSMUST00000185649 419 ntBASIC11.48□□□□□ -0.57
Prox1P48437 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.48□□□□□ -0.57
Prox1P48437 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.48□□□□□ -0.57
Prox1P48437 Gm5904-201ENSMUST00000210286 865 ntBASIC11.48□□□□□ -0.57
Prox1P48437 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.48□□□□□ -0.57
Prox1P48437 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.48□□□□□ -0.57
Prox1P48437 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Prox1P48437 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prox1P48437 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prox1P48437 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.48□□□□□ -0.57
Prox1P48437 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prox1P48437 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.48□□□□□ -0.57
Prox1P48437 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Prox1P48437 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.48□□□□□ -0.57
Prox1P48437 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prox1P48437 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prox1P48437 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prox1P48437 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.48□□□□□ -0.57
Prox1P48437 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Prox1P48437 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prox1P48437 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prox1P48437 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.48□□□□□ -0.57
Prox1P48437 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Prox1P48437 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prox1P48437 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Prox1P48437 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Prox1P48437 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Prox1P48437 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prox1P48437 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Prox1P48437 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Prox1P48437 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prox1P48437 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Prox1P48437 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Prox1P48437 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Prox1P48437 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prox1P48437 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prox1P48437 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Prox1P48437 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prox1P48437 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prox1P48437 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.47□□□□□ -0.57
Prox1P48437 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prox1P48437 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Prox1P48437 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Prox1P48437 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prox1P48437 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prox1P48437 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prox1P48437 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prox1P48437 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.47□□□□□ -0.57
Prox1P48437 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prox1P48437 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Prox1P48437 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prox1P48437 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.47□□□□□ -0.57
Prox1P48437 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prox1P48437 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prox1P48437 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Prox1P48437 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Prox1P48437 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.47□□□□□ -0.57
Prox1P48437 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.47□□□□□ -0.57
Prox1P48437 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prox1P48437 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Prox1P48437 Gm4034-201ENSMUST00000187674 480 ntBASIC11.47□□□□□ -0.57
Prox1P48437 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Prox1P48437 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prox1P48437 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms