Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm14219-201ENSMUST00000120414 288 ntBASIC11.35□□□□□ -0.59
Cdx2P43241 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC11.35□□□□□ -0.59
Cdx2P43241 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdx2P43241 Gm44315-201ENSMUST00000203041 219 ntBASIC11.35□□□□□ -0.59
Cdx2P43241 Gm8574-201ENSMUST00000203207 924 ntBASIC11.35□□□□□ -0.59
Cdx2P43241 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC11.35□□□□□ -0.59
Cdx2P43241 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.35□□□□□ -0.59
Cdx2P43241 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdx2P43241 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdx2P43241 Gm23680-201ENSMUST00000083162 164 ntBASIC11.35□□□□□ -0.59
Cdx2P43241 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdx2P43241 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Cdx2P43241 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.35□□□□□ -0.59
Cdx2P43241 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.35□□□□□ -0.59
Cdx2P43241 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Cdx2P43241 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdx2P43241 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdx2P43241 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdx2P43241 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdx2P43241 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdx2P43241 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdx2P43241 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdx2P43241 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cdx2P43241 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdx2P43241 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdx2P43241 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cdx2P43241 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdx2P43241 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdx2P43241 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdx2P43241 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdx2P43241 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cdx2P43241 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdx2P43241 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdx2P43241 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cdx2P43241 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdx2P43241 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdx2P43241 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cdx2P43241 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdx2P43241 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdx2P43241 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdx2P43241 Gm11801-201ENSMUST00000117807 746 ntBASIC11.34□□□□□ -0.59
Cdx2P43241 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdx2P43241 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdx2P43241 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdx2P43241 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Cdx2P43241 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.34□□□□□ -0.59
Cdx2P43241 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.34□□□□□ -0.59
Cdx2P43241 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC11.34□□□□□ -0.59
Cdx2P43241 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdx2P43241 Gm7940-201ENSMUST00000218195 769 ntBASIC11.34□□□□□ -0.59
Cdx2P43241 Gm3619-201ENSMUST00000219947 775 ntBASIC11.34□□□□□ -0.59
Cdx2P43241 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdx2P43241 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdx2P43241 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.34□□□□□ -0.59
Cdx2P43241 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdx2P43241 Olfr584-201ENSMUST00000098210 964 ntBASIC11.34□□□□□ -0.59
Cdx2P43241 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdx2P43241 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdx2P43241 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdx2P43241 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdx2P43241 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdx2P43241 Cog3-203ENSMUST00000227473 4197 ntBASIC11.34□□□□□ -0.59
Cdx2P43241 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdx2P43241 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.34□□□□□ -0.59
Cdx2P43241 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdx2P43241 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdx2P43241 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdx2P43241 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdx2P43241 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdx2P43241 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Cdx2P43241 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdx2P43241 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdx2P43241 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdx2P43241 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdx2P43241 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdx2P43241 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdx2P43241 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cdx2P43241 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdx2P43241 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Cdx2P43241 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdx2P43241 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cdx2P43241 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Cdx2P43241 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Cdx2P43241 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdx2P43241 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdx2P43241 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdx2P43241 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Cdx2P43241 Gm23272-201ENSMUST00000104053 129 ntBASIC11.33□□□□□ -0.6
Cdx2P43241 Gm25766-201ENSMUST00000104101 131 ntBASIC11.33□□□□□ -0.6
Cdx2P43241 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Cdx2P43241 Gm13047-201ENSMUST00000117116 815 ntBASIC11.33□□□□□ -0.6
Cdx2P43241 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.33□□□□□ -0.6
Cdx2P43241 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdx2P43241 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11.33□□□□□ -0.6
Cdx2P43241 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.33□□□□□ -0.6
Cdx2P43241 Gm17889-201ENSMUST00000198410 598 ntBASIC11.33□□□□□ -0.6
Cdx2P43241 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cdx2P43241 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.33□□□□□ -0.6
Cdx2P43241 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.33□□□□□ -0.6
Cdx2P43241 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms