Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-2P42586 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-2P42586 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-2P42586 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Gm43184-201ENSMUST00000197247 542 ntBASIC10.94□□□□□ -0.66
Nkx2-2P42586 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Gm2553-201ENSMUST00000215986 605 ntBASIC10.94□□□□□ -0.66
Nkx2-2P42586 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Nkx2-2P42586 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-2P42586 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-2P42586 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-2P42586 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.93□□□□□ -0.66
Nkx2-2P42586 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.93□□□□□ -0.66
Nkx2-2P42586 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.93□□□□□ -0.66
Nkx2-2P42586 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Gm24749-201ENSMUST00000157838 343 ntBASIC10.93□□□□□ -0.66
Nkx2-2P42586 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Gm4819-201ENSMUST00000182170 1009 ntBASIC10.93□□□□□ -0.66
Nkx2-2P42586 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Mir6420-201ENSMUST00000185032 102 ntBASIC10.93□□□□□ -0.66
Nkx2-2P42586 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Gm21027-201ENSMUST00000219300 1236 ntBASIC10.93□□□□□ -0.66
Nkx2-2P42586 Gm270-201ENSMUST00000223010 976 ntBASIC10.93□□□□□ -0.66
Nkx2-2P42586 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-2P42586 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-2P42586 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-2P42586 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-2P42586 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-2P42586 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms