Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox5P35710 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox5P35710 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox5P35710 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox5P35710 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.02□□□□□ -0.33
Sox5P35710 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC13.02□□□□□ -0.33
Sox5P35710 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox5P35710 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox5P35710 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC13.02□□□□□ -0.33
Sox5P35710 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox5P35710 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Sox5P35710 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox5P35710 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox5P35710 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox5P35710 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sox5P35710 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox5P35710 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox5P35710 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC13.01□□□□□ -0.33
Sox5P35710 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox5P35710 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sox5P35710 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox5P35710 Gm25214-201ENSMUST00000104573 129 ntBASIC13.01□□□□□ -0.33
Sox5P35710 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox5P35710 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox5P35710 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC13.01□□□□□ -0.33
Sox5P35710 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.01□□□□□ -0.33
Sox5P35710 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.01□□□□□ -0.33
Sox5P35710 Gm43002-201ENSMUST00000200310 155 ntBASIC13.01□□□□□ -0.33
Sox5P35710 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox5P35710 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox5P35710 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Sox5P35710 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.01□□□□□ -0.33
Sox5P35710 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.01□□□□□ -0.33
Sox5P35710 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox5P35710 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Sox5P35710 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
Sox5P35710 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox5P35710 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox5P35710 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Sox5P35710 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox5P35710 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox5P35710 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox5P35710 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox5P35710 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox5P35710 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox5P35710 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox5P35710 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox5P35710 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox5P35710 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox5P35710 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox5P35710 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sox5P35710 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sox5P35710 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox5P35710 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox5P35710 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC13□□□□□ -0.33
Sox5P35710 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sox5P35710 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox5P35710 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13□□□□□ -0.33
Sox5P35710 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox5P35710 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sox5P35710 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox5P35710 Gm6211-201ENSMUST00000147973 4275 ntBASIC13□□□□□ -0.33
Sox5P35710 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox5P35710 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13□□□□□ -0.33
Sox5P35710 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sox5P35710 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox5P35710 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox5P35710 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox5P35710 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Sox5P35710 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13□□□□□ -0.33
Sox5P35710 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13□□□□□ -0.33
Sox5P35710 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13□□□□□ -0.33
Sox5P35710 Gm43133-201ENSMUST00000197472 463 ntBASIC13□□□□□ -0.33
Sox5P35710 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox5P35710 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13□□□□□ -0.33
Sox5P35710 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13□□□□□ -0.33
Sox5P35710 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox5P35710 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox5P35710 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox5P35710 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13□□□□□ -0.33
Sox5P35710 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13□□□□□ -0.33
Sox5P35710 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox5P35710 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox5P35710 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Sox5P35710 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox5P35710 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sox5P35710 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Sox5P35710 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox5P35710 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC13□□□□□ -0.33
Sox5P35710 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox5P35710 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox5P35710 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.99□□□□□ -0.33
Sox5P35710 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox5P35710 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sox5P35710 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
Sox5P35710 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox5P35710 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sox5P35710 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox5P35710 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox5P35710 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms