Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sftpa1P35242 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Sftpa1P35242 Gm12419-201ENSMUST00000116649 636 ntBASIC11.04□□□□□ -0.64
Sftpa1P35242 Gm25545-201ENSMUST00000122673 323 ntBASIC11.04□□□□□ -0.64
Sftpa1P35242 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sftpa1P35242 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sftpa1P35242 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.04□□□□□ -0.64
Sftpa1P35242 Mir6923-201ENSMUST00000184592 72 ntBASIC11.04□□□□□ -0.64
Sftpa1P35242 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.04□□□□□ -0.64
Sftpa1P35242 Gm9116-201ENSMUST00000192400 1018 ntBASIC11.04□□□□□ -0.64
Sftpa1P35242 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.04□□□□□ -0.64
Sftpa1P35242 Gm38117-201ENSMUST00000194653 939 ntBASIC11.04□□□□□ -0.64
Sftpa1P35242 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sftpa1P35242 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sftpa1P35242 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Sftpa1P35242 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sftpa1P35242 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sftpa1P35242 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sftpa1P35242 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sftpa1P35242 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Sftpa1P35242 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sftpa1P35242 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sftpa1P35242 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sftpa1P35242 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sftpa1P35242 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sftpa1P35242 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sftpa1P35242 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Sftpa1P35242 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sftpa1P35242 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sftpa1P35242 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sftpa1P35242 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.04□□□□□ -0.64
Sftpa1P35242 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.04□□□□□ -0.64
Sftpa1P35242 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sftpa1P35242 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sftpa1P35242 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Sftpa1P35242 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sftpa1P35242 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Sftpa1P35242 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Sftpa1P35242 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sftpa1P35242 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sftpa1P35242 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Sftpa1P35242 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.03□□□□□ -0.64
Sftpa1P35242 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sftpa1P35242 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sftpa1P35242 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sftpa1P35242 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Sftpa1P35242 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sftpa1P35242 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sftpa1P35242 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sftpa1P35242 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sftpa1P35242 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
Sftpa1P35242 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sftpa1P35242 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Sftpa1P35242 Gm13549-201ENSMUST00000118339 796 ntBASIC11.03□□□□□ -0.64
Sftpa1P35242 Gm12030-201ENSMUST00000121917 223 ntBASIC11.03□□□□□ -0.64
Sftpa1P35242 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11.03□□□□□ -0.64
Sftpa1P35242 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.03□□□□□ -0.64
Sftpa1P35242 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sftpa1P35242 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sftpa1P35242 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sftpa1P35242 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Sftpa1P35242 Gm7902-201ENSMUST00000198842 947 ntBASIC11.03□□□□□ -0.64
Sftpa1P35242 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sftpa1P35242 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.03□□□□□ -0.64
Sftpa1P35242 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Sftpa1P35242 Gm8342-201ENSMUST00000209839 757 ntBASIC11.03□□□□□ -0.64
Sftpa1P35242 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.03□□□□□ -0.64
Sftpa1P35242 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Sftpa1P35242 Gm6722-201ENSMUST00000221586 390 ntBASIC11.03□□□□□ -0.64
Sftpa1P35242 AC126799.1-201ENSMUST00000221976 246 ntBASIC11.03□□□□□ -0.64
Sftpa1P35242 AC140375.1-201ENSMUST00000225421 694 ntBASIC11.03□□□□□ -0.64
Sftpa1P35242 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sftpa1P35242 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Sftpa1P35242 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Sftpa1P35242 Gm23680-201ENSMUST00000083162 164 ntBASIC11.03□□□□□ -0.64
Sftpa1P35242 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sftpa1P35242 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sftpa1P35242 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Sftpa1P35242 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sftpa1P35242 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.03□□□□□ -0.64
Sftpa1P35242 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sftpa1P35242 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Sftpa1P35242 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sftpa1P35242 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sftpa1P35242 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sftpa1P35242 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sftpa1P35242 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sftpa1P35242 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sftpa1P35242 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sftpa1P35242 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sftpa1P35242 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sftpa1P35242 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.64
Sftpa1P35242 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sftpa1P35242 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sftpa1P35242 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.64
Sftpa1P35242 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sftpa1P35242 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sftpa1P35242 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Sftpa1P35242 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sftpa1P35242 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms