Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Rom1P32958 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rom1P32958 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rom1P32958 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Rom1P32958 Gm24934-201ENSMUST00000103764 111 ntBASIC9.43□□□□□ -0.9
Rom1P32958 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC9.43□□□□□ -0.9
Rom1P32958 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rom1P32958 Gm11700-201ENSMUST00000119409 403 ntBASIC9.43□□□□□ -0.9
Rom1P32958 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Rom1P32958 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
Rom1P32958 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC9.43□□□□□ -0.9
Rom1P32958 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC9.43□□□□□ -0.9
Rom1P32958 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Rom1P32958 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC9.43□□□□□ -0.9
Rom1P32958 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Rom1P32958 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Rom1P32958 Gm27701-201ENSMUST00000184498 110 ntBASIC9.43□□□□□ -0.9
Rom1P32958 Gm44405-201ENSMUST00000198952 126 ntBASIC9.43□□□□□ -0.9
Rom1P32958 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC9.43□□□□□ -0.9
Rom1P32958 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Rom1P32958 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Rom1P32958 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Rom1P32958 AC122811.1-201ENSMUST00000222257 2921 ntBASIC9.43□□□□□ -0.9
Rom1P32958 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rom1P32958 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Rom1P32958 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Rom1P32958 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rom1P32958 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Rom1P32958 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rom1P32958 Gm42141-201ENSMUST00000196534 2172 ntBASIC9.43□□□□□ -0.9
Rom1P32958 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rom1P32958 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rom1P32958 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rom1P32958 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Gm8146-201ENSMUST00000192106 1847 ntBASIC9.42□□□□□ -0.9
Rom1P32958 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC9.42□□□□□ -0.9
Rom1P32958 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Rom1P32958 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Rom1P32958 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Gm10652-201ENSMUST00000199790 2622 ntBASIC9.42□□□□□ -0.9
Rom1P32958 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 AC154537.1-201ENSMUST00000226101 1304 ntBASIC9.42□□□□□ -0.9
Rom1P32958 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC9.42□□□□□ -0.9
Rom1P32958 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC9.42□□□□□ -0.9
Rom1P32958 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC9.42□□□□□ -0.9
Rom1P32958 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Gm8810-201ENSMUST00000172895 754 ntBASIC9.42□□□□□ -0.9
Rom1P32958 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Gm27023-201ENSMUST00000182372 285 ntBASIC9.42□□□□□ -0.9
Rom1P32958 Mir6956-201ENSMUST00000183598 62 ntBASIC9.42□□□□□ -0.9
Rom1P32958 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Rom1P32958 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC9.42□□□□□ -0.9
Rom1P32958 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC9.42□□□□□ -0.9
Rom1P32958 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC9.42□□□□□ -0.9
Rom1P32958 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
Rom1P32958 AC125209.1-201ENSMUST00000225812 766 ntBASIC9.42□□□□□ -0.9
Rom1P32958 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC9.42□□□□□ -0.9
Rom1P32958 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC9.42□□□□□ -0.9
Rom1P32958 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC9.42□□□□□ -0.9
Rom1P32958 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
Rom1P32958 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Rom1P32958 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rom1P32958 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Rom1P32958 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms