Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm9083-201ENSMUST00000120423 819 ntBASIC10.98□□□□□ -0.65
Nedd8P29595 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nedd8P29595 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nedd8P29595 Gm6152-201ENSMUST00000151704 340 ntBASIC10.98□□□□□ -0.65
Nedd8P29595 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.98□□□□□ -0.65
Nedd8P29595 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nedd8P29595 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Nedd8P29595 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC10.98□□□□□ -0.65
Nedd8P29595 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nedd8P29595 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nedd8P29595 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nedd8P29595 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nedd8P29595 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.98□□□□□ -0.65
Nedd8P29595 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nedd8P29595 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nedd8P29595 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.98□□□□□ -0.65
Nedd8P29595 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Nedd8P29595 Gm42602-201ENSMUST00000200288 3224 ntBASIC10.98□□□□□ -0.65
Nedd8P29595 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nedd8P29595 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nedd8P29595 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.98□□□□□ -0.65
Nedd8P29595 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC10.98□□□□□ -0.65
Nedd8P29595 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nedd8P29595 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nedd8P29595 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Nedd8P29595 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Nedd8P29595 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.98□□□□□ -0.65
Nedd8P29595 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nedd8P29595 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Nedd8P29595 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nedd8P29595 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nedd8P29595 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nedd8P29595 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.98□□□□□ -0.65
Nedd8P29595 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nedd8P29595 Gm19040-201ENSMUST00000203280 4726 ntBASIC10.97□□□□□ -0.65
Nedd8P29595 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nedd8P29595 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Nedd8P29595 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nedd8P29595 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Nedd8P29595 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.97□□□□□ -0.65
Nedd8P29595 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.97□□□□□ -0.65
Nedd8P29595 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nedd8P29595 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nedd8P29595 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Nedd8P29595 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Nedd8P29595 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Nedd8P29595 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nedd8P29595 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC10.97□□□□□ -0.65
Nedd8P29595 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nedd8P29595 Gm28760-201ENSMUST00000185995 736 ntBASIC10.97□□□□□ -0.65
Nedd8P29595 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC10.97□□□□□ -0.65
Nedd8P29595 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nedd8P29595 AC225888.1-201ENSMUST00000227184 728 ntBASIC10.97□□□□□ -0.65
Nedd8P29595 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nedd8P29595 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nedd8P29595 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nedd8P29595 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Nedd8P29595 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nedd8P29595 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nedd8P29595 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nedd8P29595 AC154527.2-201ENSMUST00000225256 1466 ntBASIC10.97□□□□□ -0.65
Nedd8P29595 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Nedd8P29595 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.97□□□□□ -0.65
Nedd8P29595 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nedd8P29595 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nedd8P29595 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Nedd8P29595 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nedd8P29595 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nedd8P29595 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nedd8P29595 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Nedd8P29595 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nedd8P29595 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nedd8P29595 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Nedd8P29595 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Nedd8P29595 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nedd8P29595 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Nedd8P29595 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Nedd8P29595 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nedd8P29595 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Nedd8P29595 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
Nedd8P29595 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nedd8P29595 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nedd8P29595 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nedd8P29595 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Nedd8P29595 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
Nedd8P29595 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.96□□□□□ -0.65
Nedd8P29595 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nedd8P29595 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Nedd8P29595 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
Nedd8P29595 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nedd8P29595 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Nedd8P29595 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nedd8P29595 Gm44775-201ENSMUST00000207266 1456 ntBASIC10.96□□□□□ -0.65
Nedd8P29595 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nedd8P29595 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nedd8P29595 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.96□□□□□ -0.65
Nedd8P29595 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nedd8P29595 Snord83b-201ENSMUST00000104546 94 ntBASIC10.96□□□□□ -0.65
Nedd8P29595 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Nedd8P29595 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms