Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC13.69□□□□□ -0.22
Vcam1P29533 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC13.69□□□□□ -0.22
Vcam1P29533 Gm23153-201ENSMUST00000175323 313 ntBASIC13.69□□□□□ -0.22
Vcam1P29533 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcam1P29533 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcam1P29533 Mir6998-201ENSMUST00000183343 64 ntBASIC13.69□□□□□ -0.22
Vcam1P29533 Gm37981-201ENSMUST00000194280 535 ntBASIC13.69□□□□□ -0.22
Vcam1P29533 Gm44158-201ENSMUST00000203881 505 ntBASIC13.69□□□□□ -0.22
Vcam1P29533 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC13.69□□□□□ -0.22
Vcam1P29533 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcam1P29533 Gm2875-201ENSMUST00000211333 360 ntBASIC13.69□□□□□ -0.22
Vcam1P29533 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vcam1P29533 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC13.69□□□□□ -0.22
Vcam1P29533 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC13.69□□□□□ -0.22
Vcam1P29533 AC154257.1-202ENSMUST00000224729 843 ntBASIC13.69□□□□□ -0.22
Vcam1P29533 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Vcam1P29533 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC13.69□□□□□ -0.22
Vcam1P29533 Gm5451-201ENSMUST00000080545 579 ntBASIC13.69□□□□□ -0.22
Vcam1P29533 Mirlet7i-201ENSMUST00000083472 85 ntBASIC13.69□□□□□ -0.22
Vcam1P29533 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcam1P29533 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcam1P29533 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcam1P29533 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcam1P29533 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcam1P29533 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vcam1P29533 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcam1P29533 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Vcam1P29533 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcam1P29533 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcam1P29533 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vcam1P29533 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcam1P29533 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Vcam1P29533 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcam1P29533 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcam1P29533 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Vcam1P29533 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vcam1P29533 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vcam1P29533 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Vcam1P29533 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC13.68□□□□□ -0.22
Vcam1P29533 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vcam1P29533 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vcam1P29533 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Vcam1P29533 Gm13937-201ENSMUST00000121000 988 ntBASIC13.68□□□□□ -0.22
Vcam1P29533 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC13.68□□□□□ -0.22
Vcam1P29533 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Vcam1P29533 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vcam1P29533 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
Vcam1P29533 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vcam1P29533 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vcam1P29533 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Vcam1P29533 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vcam1P29533 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Vcam1P29533 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vcam1P29533 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vcam1P29533 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vcam1P29533 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Vcam1P29533 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vcam1P29533 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Vcam1P29533 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vcam1P29533 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Vcam1P29533 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.67□□□□□ -0.22
Vcam1P29533 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vcam1P29533 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vcam1P29533 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Vcam1P29533 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Vcam1P29533 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vcam1P29533 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vcam1P29533 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vcam1P29533 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vcam1P29533 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vcam1P29533 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC13.67□□□□□ -0.22
Vcam1P29533 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vcam1P29533 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC13.67□□□□□ -0.22
Vcam1P29533 Gm11244-201ENSMUST00000121243 237 ntBASIC13.67□□□□□ -0.22
Vcam1P29533 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC13.67□□□□□ -0.22
Vcam1P29533 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC13.67□□□□□ -0.22
Vcam1P29533 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vcam1P29533 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC13.67□□□□□ -0.22
Vcam1P29533 Gm44315-201ENSMUST00000203041 219 ntBASIC13.67□□□□□ -0.22
Vcam1P29533 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC13.67□□□□□ -0.22
Vcam1P29533 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Vcam1P29533 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC13.67□□□□□ -0.22
Vcam1P29533 AC118639.2-201ENSMUST00000226289 223 ntBASIC13.67□□□□□ -0.22
Vcam1P29533 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.67□□□□□ -0.22
Vcam1P29533 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vcam1P29533 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.67□□□□□ -0.22
Vcam1P29533 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vcam1P29533 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vcam1P29533 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vcam1P29533 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vcam1P29533 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vcam1P29533 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Vcam1P29533 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Vcam1P29533 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vcam1P29533 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC13.66□□□□□ -0.22
Vcam1P29533 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vcam1P29533 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vcam1P29533 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vcam1P29533 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vcam1P29533 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms