Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.31□□□□□ -0.44
Nfkb1P25799 Gm6905-201ENSMUST00000205729 511 ntBASIC12.31□□□□□ -0.44
Nfkb1P25799 Gm45770-201ENSMUST00000212105 616 ntBASIC12.31□□□□□ -0.44
Nfkb1P25799 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.31□□□□□ -0.44
Nfkb1P25799 Ginm1-202ENSMUST00000065124 300 ntBASIC12.31□□□□□ -0.44
Nfkb1P25799 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nfkb1P25799 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nfkb1P25799 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nfkb1P25799 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nfkb1P25799 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nfkb1P25799 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nfkb1P25799 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nfkb1P25799 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nfkb1P25799 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.31□□□□□ -0.44
Nfkb1P25799 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nfkb1P25799 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nfkb1P25799 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nfkb1P25799 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nfkb1P25799 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nfkb1P25799 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nfkb1P25799 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nfkb1P25799 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.3□□□□□ -0.44
Nfkb1P25799 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nfkb1P25799 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nfkb1P25799 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nfkb1P25799 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nfkb1P25799 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nfkb1P25799 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Nfkb1P25799 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nfkb1P25799 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nfkb1P25799 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Nfkb1P25799 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nfkb1P25799 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nfkb1P25799 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nfkb1P25799 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nfkb1P25799 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nfkb1P25799 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nfkb1P25799 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Nfkb1P25799 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.3□□□□□ -0.44
Nfkb1P25799 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Nfkb1P25799 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nfkb1P25799 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nfkb1P25799 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nfkb1P25799 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Nfkb1P25799 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nfkb1P25799 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nfkb1P25799 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nfkb1P25799 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Nfkb1P25799 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nfkb1P25799 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nfkb1P25799 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.3□□□□□ -0.44
Nfkb1P25799 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nfkb1P25799 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nfkb1P25799 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nfkb1P25799 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.3□□□□□ -0.44
Nfkb1P25799 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nfkb1P25799 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nfkb1P25799 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nfkb1P25799 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nfkb1P25799 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.3□□□□□ -0.44
Nfkb1P25799 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nfkb1P25799 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nfkb1P25799 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nfkb1P25799 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Nfkb1P25799 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nfkb1P25799 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nfkb1P25799 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nfkb1P25799 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.3□□□□□ -0.44
Nfkb1P25799 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nfkb1P25799 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.29□□□□□ -0.44
Nfkb1P25799 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nfkb1P25799 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Nfkb1P25799 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nfkb1P25799 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.29□□□□□ -0.44
Nfkb1P25799 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nfkb1P25799 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Nfkb1P25799 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nfkb1P25799 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.29□□□□□ -0.44
Nfkb1P25799 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nfkb1P25799 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nfkb1P25799 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nfkb1P25799 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.29□□□□□ -0.44
Nfkb1P25799 Gm11663-201ENSMUST00000117888 290 ntBASIC12.29□□□□□ -0.44
Nfkb1P25799 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.29□□□□□ -0.44
Nfkb1P25799 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.29□□□□□ -0.44
Nfkb1P25799 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nfkb1P25799 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nfkb1P25799 Gm5706-201ENSMUST00000181525 993 ntBASIC12.29□□□□□ -0.44
Nfkb1P25799 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.29□□□□□ -0.44
Nfkb1P25799 Gm17931-201ENSMUST00000208132 634 ntBASIC12.29□□□□□ -0.44
Nfkb1P25799 Gm29787-201ENSMUST00000222129 849 ntBASIC12.29□□□□□ -0.44
Nfkb1P25799 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nfkb1P25799 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nfkb1P25799 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.29□□□□□ -0.44
Nfkb1P25799 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nfkb1P25799 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Nfkb1P25799 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Nfkb1P25799 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nfkb1P25799 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.29□□□□□ -0.44
Nfkb1P25799 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms