Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm7775-201ENSMUST00000218871 853 ntBASIC9.75□□□□□ -0.85
Sdc1P18828 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC9.75□□□□□ -0.85
Sdc1P18828 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sdc1P18828 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sdc1P18828 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sdc1P18828 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sdc1P18828 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Sdc1P18828 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Sdc1P18828 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sdc1P18828 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sdc1P18828 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sdc1P18828 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sdc1P18828 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sdc1P18828 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sdc1P18828 Gm43823-201ENSMUST00000197391 1808 ntBASIC9.75□□□□□ -0.85
Sdc1P18828 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sdc1P18828 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Sdc1P18828 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Sdc1P18828 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sdc1P18828 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sdc1P18828 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sdc1P18828 Gm5740-201ENSMUST00000211003 1857 ntBASIC9.74□□□□□ -0.85
Sdc1P18828 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sdc1P18828 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Sdc1P18828 Gm9035-201ENSMUST00000218318 1697 ntBASIC9.74□□□□□ -0.85
Sdc1P18828 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Sdc1P18828 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC9.74□□□□□ -0.85
Sdc1P18828 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sdc1P18828 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Sdc1P18828 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sdc1P18828 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sdc1P18828 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Sdc1P18828 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Sdc1P18828 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sdc1P18828 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sdc1P18828 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC9.74□□□□□ -0.85
Sdc1P18828 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC9.74□□□□□ -0.85
Sdc1P18828 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Sdc1P18828 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC9.74□□□□□ -0.85
Sdc1P18828 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC9.74□□□□□ -0.85
Sdc1P18828 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Sdc1P18828 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC9.74□□□□□ -0.85
Sdc1P18828 Gm38294-201ENSMUST00000192831 381 ntBASIC9.74□□□□□ -0.85
Sdc1P18828 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC9.74□□□□□ -0.85
Sdc1P18828 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sdc1P18828 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Sdc1P18828 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC9.74□□□□□ -0.85
Sdc1P18828 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC9.74□□□□□ -0.85
Sdc1P18828 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sdc1P18828 AC238811.1-201ENSMUST00000225302 441 ntBASIC9.74□□□□□ -0.85
Sdc1P18828 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sdc1P18828 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sdc1P18828 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Sdc1P18828 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sdc1P18828 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sdc1P18828 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Sdc1P18828 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC9.74□□□□□ -0.85
Sdc1P18828 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC9.74□□□□□ -0.85
Sdc1P18828 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC9.74□□□□□ -0.85
Sdc1P18828 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sdc1P18828 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sdc1P18828 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC9.74□□□□□ -0.85
Sdc1P18828 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sdc1P18828 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sdc1P18828 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sdc1P18828 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC9.74□□□□□ -0.85
Sdc1P18828 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Sdc1P18828 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Sdc1P18828 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Sdc1P18828 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sdc1P18828 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sdc1P18828 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sdc1P18828 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sdc1P18828 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sdc1P18828 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC9.73□□□□□ -0.85
Sdc1P18828 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Sdc1P18828 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sdc1P18828 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sdc1P18828 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sdc1P18828 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sdc1P18828 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sdc1P18828 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sdc1P18828 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sdc1P18828 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sdc1P18828 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sdc1P18828 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Sdc1P18828 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC9.73□□□□□ -0.85
Sdc1P18828 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Sdc1P18828 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sdc1P18828 Gm5648-201ENSMUST00000122244 1587 ntBASIC9.73□□□□□ -0.85
Sdc1P18828 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Sdc1P18828 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sdc1P18828 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sdc1P18828 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sdc1P18828 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sdc1P18828 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC9.73□□□□□ -0.85
Sdc1P18828 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sdc1P18828 Gm11779-201ENSMUST00000118541 368 ntBASIC9.73□□□□□ -0.85
Sdc1P18828 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC9.73□□□□□ -0.85
Sdc1P18828 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms