Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm23119-201ENSMUST00000158610 140 ntBASIC9.53□□□□□ -0.88
Hoxd3P09027 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxd3P09027 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC9.53□□□□□ -0.88
Hoxd3P09027 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Hoxd3P09027 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxd3P09027 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxd3P09027 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC9.53□□□□□ -0.88
Hoxd3P09027 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC9.53□□□□□ -0.88
Hoxd3P09027 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC9.53□□□□□ -0.88
Hoxd3P09027 Gm9230-201ENSMUST00000188228 532 ntBASIC9.53□□□□□ -0.88
Hoxd3P09027 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC9.53□□□□□ -0.88
Hoxd3P09027 Gm18827-201ENSMUST00000188341 790 ntBASIC9.53□□□□□ -0.88
Hoxd3P09027 Gm29436-202ENSMUST00000189054 1172 ntTSL 5 BASIC9.53□□□□□ -0.88
Hoxd3P09027 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC9.53□□□□□ -0.88
Hoxd3P09027 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC9.53□□□□□ -0.88
Hoxd3P09027 Gstp-ps-201ENSMUST00000195526 631 ntBASIC9.53□□□□□ -0.88
Hoxd3P09027 Gm4870-201ENSMUST00000198525 1251 ntBASIC9.53□□□□□ -0.88
Hoxd3P09027 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC9.53□□□□□ -0.88
Hoxd3P09027 Gm45224-201ENSMUST00000208203 414 ntBASIC9.53□□□□□ -0.88
Hoxd3P09027 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC9.53□□□□□ -0.88
Hoxd3P09027 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxd3P09027 Gm9996-201ENSMUST00000070359 913 ntBASIC9.53□□□□□ -0.88
Hoxd3P09027 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Hoxd3P09027 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Hoxd3P09027 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxd3P09027 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC9.53□□□□□ -0.88
Hoxd3P09027 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxd3P09027 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxd3P09027 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxd3P09027 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC9.53□□□□□ -0.88
Hoxd3P09027 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxd3P09027 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxd3P09027 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxd3P09027 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Hoxd3P09027 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Hoxd3P09027 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxd3P09027 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxd3P09027 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxd3P09027 Gm4735-201ENSMUST00000138679 1302 ntBASIC9.53□□□□□ -0.88
Hoxd3P09027 Gm5855-201ENSMUST00000200240 1305 ntBASIC9.53□□□□□ -0.88
Hoxd3P09027 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxd3P09027 Gm5884-201ENSMUST00000036712 1479 ntBASIC9.53□□□□□ -0.88
Hoxd3P09027 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxd3P09027 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxd3P09027 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC9.52□□□□□ -0.88
Hoxd3P09027 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Hoxd3P09027 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Hoxd3P09027 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Hoxd3P09027 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC9.52□□□□□ -0.88
Hoxd3P09027 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Hoxd3P09027 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Hoxd3P09027 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Hoxd3P09027 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC9.52□□□□□ -0.89
Hoxd3P09027 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Hoxd3P09027 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxd3P09027 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxd3P09027 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxd3P09027 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxd3P09027 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC9.52□□□□□ -0.89
Hoxd3P09027 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxd3P09027 Gm14644-201ENSMUST00000116671 647 ntBASIC9.52□□□□□ -0.89
Hoxd3P09027 Gm15161-201ENSMUST00000117340 387 ntBASIC9.52□□□□□ -0.89
Hoxd3P09027 Gm11439-201ENSMUST00000118598 409 ntBASIC9.52□□□□□ -0.89
Hoxd3P09027 Gm13792-201ENSMUST00000121350 423 ntBASIC9.52□□□□□ -0.89
Hoxd3P09027 Gm14760-201ENSMUST00000121831 999 ntBASIC9.52□□□□□ -0.89
Hoxd3P09027 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxd3P09027 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Hoxd3P09027 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxd3P09027 Rn7s1-201ENSMUST00000174924 300 ntBASIC9.52□□□□□ -0.89
Hoxd3P09027 Rn7s2-201ENSMUST00000175032 300 ntBASIC9.52□□□□□ -0.89
Hoxd3P09027 Gm26461-201ENSMUST00000175064 290 ntBASIC9.52□□□□□ -0.89
Hoxd3P09027 Gm13147-202ENSMUST00000177526 1173 ntBASIC9.52□□□□□ -0.89
Hoxd3P09027 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxd3P09027 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxd3P09027 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC9.52□□□□□ -0.89
Hoxd3P09027 Gm43997-201ENSMUST00000203986 1005 ntBASIC9.52□□□□□ -0.89
Hoxd3P09027 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC9.52□□□□□ -0.89
Hoxd3P09027 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxd3P09027 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC9.52□□□□□ -0.89
Hoxd3P09027 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC9.52□□□□□ -0.89
Hoxd3P09027 AC163667.3-201ENSMUST00000225774 222 ntBASIC9.52□□□□□ -0.89
Hoxd3P09027 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxd3P09027 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxd3P09027 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxd3P09027 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxd3P09027 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC9.52□□□□□ -0.89
Hoxd3P09027 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxd3P09027 Gm8385-201ENSMUST00000058999 643 ntBASIC9.52□□□□□ -0.89
Hoxd3P09027 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxd3P09027 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxd3P09027 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
Hoxd3P09027 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxd3P09027 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Hoxd3P09027 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxd3P09027 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Hoxd3P09027 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxd3P09027 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxd3P09027 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxd3P09027 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxd3P09027 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms