Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
ApoeP08226 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ApoeP08226 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ApoeP08226 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
ApoeP08226 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.3□□□□□ -0.6
ApoeP08226 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ApoeP08226 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ApoeP08226 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.3□□□□□ -0.6
ApoeP08226 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
ApoeP08226 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ApoeP08226 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
ApoeP08226 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ApoeP08226 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ApoeP08226 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
ApoeP08226 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.3□□□□□ -0.6
ApoeP08226 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ApoeP08226 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ApoeP08226 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ApoeP08226 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ApoeP08226 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.3□□□□□ -0.6
ApoeP08226 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ApoeP08226 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.3□□□□□ -0.6
ApoeP08226 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ApoeP08226 Gm38241-201ENSMUST00000192641 898 ntBASIC11.3□□□□□ -0.6
ApoeP08226 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.3□□□□□ -0.6
ApoeP08226 Gm17931-201ENSMUST00000208132 634 ntBASIC11.3□□□□□ -0.6
ApoeP08226 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.3□□□□□ -0.6
ApoeP08226 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ApoeP08226 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.3□□□□□ -0.6
ApoeP08226 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.3□□□□□ -0.6
ApoeP08226 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ApoeP08226 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
ApoeP08226 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ApoeP08226 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
ApoeP08226 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.3□□□□□ -0.6
ApoeP08226 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ApoeP08226 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
ApoeP08226 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.3□□□□□ -0.6
ApoeP08226 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.3□□□□□ -0.6
ApoeP08226 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.3□□□□□ -0.6
ApoeP08226 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
ApoeP08226 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ApoeP08226 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ApoeP08226 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ApoeP08226 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ApoeP08226 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ApoeP08226 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ApoeP08226 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
ApoeP08226 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ApoeP08226 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ApoeP08226 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ApoeP08226 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
ApoeP08226 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.29□□□□□ -0.6
ApoeP08226 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.29□□□□□ -0.6
ApoeP08226 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.29□□□□□ -0.6
ApoeP08226 Gm27023-201ENSMUST00000182372 285 ntBASIC11.29□□□□□ -0.6
ApoeP08226 Gm27486-201ENSMUST00000184923 80 ntBASIC11.29□□□□□ -0.6
ApoeP08226 Gm27892-201ENSMUST00000185017 106 ntBASIC11.29□□□□□ -0.6
ApoeP08226 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ApoeP08226 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ApoeP08226 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.29□□□□□ -0.6
ApoeP08226 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ApoeP08226 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.29□□□□□ -0.6
ApoeP08226 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ApoeP08226 Gm6180-201ENSMUST00000065243 498 ntBASIC11.29□□□□□ -0.6
ApoeP08226 Gm10268-201ENSMUST00000085340 555 ntBASIC11.29□□□□□ -0.6
ApoeP08226 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ApoeP08226 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ApoeP08226 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ApoeP08226 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ApoeP08226 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ApoeP08226 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
ApoeP08226 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ApoeP08226 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ApoeP08226 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
ApoeP08226 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
ApoeP08226 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ApoeP08226 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
ApoeP08226 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ApoeP08226 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ApoeP08226 Rgr-203ENSMUST00000225070 4704 ntBASIC11.28□□□□□ -0.6
ApoeP08226 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
ApoeP08226 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.28□□□□□ -0.6
ApoeP08226 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
ApoeP08226 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.28□□□□□ -0.6
ApoeP08226 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
ApoeP08226 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 CT009713.5-203ENSMUST00000224218 2079 ntBASIC11.28□□□□□ -0.6
ApoeP08226 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms