Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TnfP06804 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TnfP06804 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TnfP06804 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.66□□□□□ -0.38
TnfP06804 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TnfP06804 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TnfP06804 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TnfP06804 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.66□□□□□ -0.38
TnfP06804 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TnfP06804 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.66□□□□□ -0.38
TnfP06804 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TnfP06804 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TnfP06804 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TnfP06804 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TnfP06804 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TnfP06804 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TnfP06804 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TnfP06804 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TnfP06804 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TnfP06804 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TnfP06804 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TnfP06804 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TnfP06804 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TnfP06804 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
TnfP06804 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.65□□□□□ -0.38
TnfP06804 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
TnfP06804 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TnfP06804 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TnfP06804 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TnfP06804 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TnfP06804 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TnfP06804 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TnfP06804 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TnfP06804 Gm15573-201ENSMUST00000119487 540 ntBASIC12.65□□□□□ -0.38
TnfP06804 Gm11956-201ENSMUST00000119525 512 ntBASIC12.65□□□□□ -0.38
TnfP06804 Gm7666-201ENSMUST00000146631 819 ntBASIC12.65□□□□□ -0.38
TnfP06804 Gm22144-201ENSMUST00000157402 102 ntBASIC12.65□□□□□ -0.38
TnfP06804 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TnfP06804 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.65□□□□□ -0.38
TnfP06804 Gm9192-201ENSMUST00000183221 985 ntBASIC12.65□□□□□ -0.38
TnfP06804 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TnfP06804 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.65□□□□□ -0.38
TnfP06804 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.65□□□□□ -0.38
TnfP06804 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.65□□□□□ -0.38
TnfP06804 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.65□□□□□ -0.38
TnfP06804 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TnfP06804 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TnfP06804 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TnfP06804 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
TnfP06804 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TnfP06804 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.65□□□□□ -0.38
TnfP06804 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
TnfP06804 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.65□□□□□ -0.38
TnfP06804 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TnfP06804 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TnfP06804 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TnfP06804 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TnfP06804 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
TnfP06804 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TnfP06804 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TnfP06804 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TnfP06804 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.39
TnfP06804 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
TnfP06804 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
TnfP06804 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
TnfP06804 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
TnfP06804 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TnfP06804 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TnfP06804 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
TnfP06804 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TnfP06804 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TnfP06804 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.64□□□□□ -0.39
TnfP06804 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TnfP06804 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
TnfP06804 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TnfP06804 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TnfP06804 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
TnfP06804 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TnfP06804 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TnfP06804 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.64□□□□□ -0.39
TnfP06804 Gm14193-201ENSMUST00000105067 153 ntBASIC12.64□□□□□ -0.39
TnfP06804 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
TnfP06804 Gm8731-201ENSMUST00000118088 412 ntBASIC12.64□□□□□ -0.39
TnfP06804 Gm15131-201ENSMUST00000119124 595 ntBASIC12.64□□□□□ -0.39
TnfP06804 Gm14441-201ENSMUST00000121960 540 ntBASIC12.64□□□□□ -0.39
TnfP06804 Gm4726-201ENSMUST00000135604 736 ntBASIC12.64□□□□□ -0.39
TnfP06804 Gm6019-201ENSMUST00000148369 736 ntBASIC12.64□□□□□ -0.39
TnfP06804 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
TnfP06804 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TnfP06804 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TnfP06804 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TnfP06804 Gm29499-201ENSMUST00000189151 486 ntBASIC12.64□□□□□ -0.39
TnfP06804 Gm28329-201ENSMUST00000191208 689 ntBASIC12.64□□□□□ -0.39
TnfP06804 Gm29171-201ENSMUST00000191397 486 ntBASIC12.64□□□□□ -0.39
TnfP06804 Gm9136-201ENSMUST00000193368 454 ntBASIC12.64□□□□□ -0.39
TnfP06804 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.64□□□□□ -0.39
TnfP06804 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.64□□□□□ -0.39
TnfP06804 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.64□□□□□ -0.39
TnfP06804 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.64□□□□□ -0.39
TnfP06804 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms