Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Mir6958-201ENSMUST00000184207 73 ntBASIC10.53□□□□□ -0.72
NgfP01139 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.53□□□□□ -0.72
NgfP01139 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.53□□□□□ -0.72
NgfP01139 Gm42657-201ENSMUST00000201746 211 ntBASIC10.53□□□□□ -0.72
NgfP01139 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.53□□□□□ -0.72
NgfP01139 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC10.53□□□□□ -0.72
NgfP01139 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.53□□□□□ -0.72
NgfP01139 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC10.53□□□□□ -0.72
NgfP01139 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
NgfP01139 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
NgfP01139 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
NgfP01139 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NgfP01139 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
NgfP01139 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NgfP01139 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NgfP01139 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
NgfP01139 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NgfP01139 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
NgfP01139 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
NgfP01139 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NgfP01139 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NgfP01139 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC10.52□□□□□ -0.72
NgfP01139 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
NgfP01139 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.72
NgfP01139 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
NgfP01139 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
NgfP01139 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
NgfP01139 AC166836.1-201ENSMUST00000219933 1795 ntBASIC10.52□□□□□ -0.72
NgfP01139 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
NgfP01139 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
NgfP01139 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.52□□□□□ -0.72
NgfP01139 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
NgfP01139 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
NgfP01139 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
NgfP01139 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
NgfP01139 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
NgfP01139 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC10.52□□□□□ -0.73
NgfP01139 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC10.52□□□□□ -0.73
NgfP01139 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
NgfP01139 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC10.52□□□□□ -0.73
NgfP01139 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
NgfP01139 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
NgfP01139 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
NgfP01139 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NgfP01139 Mir8093-201ENSMUST00000185043 137 ntBASIC10.52□□□□□ -0.73
NgfP01139 Gm8574-201ENSMUST00000203207 924 ntBASIC10.52□□□□□ -0.73
NgfP01139 Gm44158-201ENSMUST00000203881 505 ntBASIC10.52□□□□□ -0.73
NgfP01139 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.52□□□□□ -0.73
NgfP01139 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC10.52□□□□□ -0.73
NgfP01139 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC10.52□□□□□ -0.73
NgfP01139 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.52□□□□□ -0.73
NgfP01139 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NgfP01139 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
NgfP01139 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
NgfP01139 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
NgfP01139 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
NgfP01139 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
NgfP01139 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
NgfP01139 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.52□□□□□ -0.73
NgfP01139 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
NgfP01139 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NgfP01139 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
NgfP01139 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
NgfP01139 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
NgfP01139 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
NgfP01139 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NgfP01139 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
NgfP01139 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
NgfP01139 Gm37644-201ENSMUST00000192190 2270 ntBASIC10.51□□□□□ -0.73
NgfP01139 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
NgfP01139 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NgfP01139 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
NgfP01139 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NgfP01139 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
NgfP01139 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.51□□□□□ -0.73
NgfP01139 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
NgfP01139 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
NgfP01139 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
NgfP01139 Gm4993-201ENSMUST00000118719 1174 ntBASIC10.51□□□□□ -0.73
NgfP01139 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
NgfP01139 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
NgfP01139 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
NgfP01139 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NgfP01139 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
NgfP01139 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.51□□□□□ -0.73
NgfP01139 Gm5982-201ENSMUST00000196234 512 ntBASIC10.51□□□□□ -0.73
NgfP01139 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC10.51□□□□□ -0.73
NgfP01139 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC10.51□□□□□ -0.73
NgfP01139 AC166341.2-201ENSMUST00000220571 120 ntBASIC10.51□□□□□ -0.73
NgfP01139 Gm19009-201ENSMUST00000223072 823 ntBASIC10.51□□□□□ -0.73
NgfP01139 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.51□□□□□ -0.73
NgfP01139 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NgfP01139 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NgfP01139 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
NgfP01139 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NgfP01139 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
NgfP01139 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
NgfP01139 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NgfP01139 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
NgfP01139 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms