Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CopeO89079 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CopeO89079 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CopeO89079 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.29□□□□□ -0.44
CopeO89079 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.29□□□□□ -0.44
CopeO89079 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopeO89079 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopeO89079 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
CopeO89079 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopeO89079 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopeO89079 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CopeO89079 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CopeO89079 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
CopeO89079 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopeO89079 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CopeO89079 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
CopeO89079 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopeO89079 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopeO89079 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.29□□□□□ -0.44
CopeO89079 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopeO89079 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CopeO89079 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.29□□□□□ -0.44
CopeO89079 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.29□□□□□ -0.44
CopeO89079 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopeO89079 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopeO89079 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopeO89079 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CopeO89079 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.29□□□□□ -0.44
CopeO89079 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CopeO89079 Gm25261-201ENSMUST00000157416 134 ntBASIC12.29□□□□□ -0.44
CopeO89079 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.29□□□□□ -0.44
CopeO89079 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.29□□□□□ -0.44
CopeO89079 Gm38241-201ENSMUST00000192641 898 ntBASIC12.29□□□□□ -0.44
CopeO89079 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.29□□□□□ -0.44
CopeO89079 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.29□□□□□ -0.44
CopeO89079 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.29□□□□□ -0.44
CopeO89079 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopeO89079 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
CopeO89079 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.29□□□□□ -0.44
CopeO89079 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopeO89079 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopeO89079 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopeO89079 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CopeO89079 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopeO89079 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopeO89079 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CopeO89079 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopeO89079 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.29□□□□□ -0.44
CopeO89079 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopeO89079 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopeO89079 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CopeO89079 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.29□□□□□ -0.44
CopeO89079 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CopeO89079 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CopeO89079 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CopeO89079 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
CopeO89079 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CopeO89079 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CopeO89079 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.28□□□□□ -0.44
CopeO89079 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopeO89079 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopeO89079 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopeO89079 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopeO89079 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CopeO89079 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.28□□□□□ -0.44
CopeO89079 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopeO89079 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.28□□□□□ -0.44
CopeO89079 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.28□□□□□ -0.44
CopeO89079 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopeO89079 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopeO89079 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopeO89079 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CopeO89079 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopeO89079 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
CopeO89079 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopeO89079 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopeO89079 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopeO89079 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopeO89079 Gm13875-201ENSMUST00000120162 282 ntBASIC12.28□□□□□ -0.44
CopeO89079 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.28□□□□□ -0.44
CopeO89079 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CopeO89079 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopeO89079 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CopeO89079 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopeO89079 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.28□□□□□ -0.44
CopeO89079 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CopeO89079 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CopeO89079 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopeO89079 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopeO89079 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CopeO89079 Snora73a-201ENSMUST00000082453 205 ntBASIC12.28□□□□□ -0.44
CopeO89079 Gm8420-201ENSMUST00000097103 598 ntBASIC12.28□□□□□ -0.44
CopeO89079 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CopeO89079 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopeO89079 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopeO89079 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopeO89079 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.28□□□□□ -0.44
CopeO89079 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopeO89079 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.28□□□□□ -0.44
CopeO89079 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms