Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarce1O54941 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Smarce1O54941 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smarce1O54941 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarce1O54941 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarce1O54941 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarce1O54941 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Smarce1O54941 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarce1O54941 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Smarce1O54941 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarce1O54941 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smarce1O54941 Gm5419-201ENSMUST00000119301 527 ntBASIC14.17□□□□□ -0.14
Smarce1O54941 Gm4986-201ENSMUST00000119731 549 ntBASIC14.17□□□□□ -0.14
Smarce1O54941 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.17□□□□□ -0.14
Smarce1O54941 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarce1O54941 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smarce1O54941 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC14.17□□□□□ -0.14
Smarce1O54941 Gm6114-201ENSMUST00000182472 968 ntBASIC14.17□□□□□ -0.14
Smarce1O54941 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.17□□□□□ -0.14
Smarce1O54941 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Smarce1O54941 Gm5950-201ENSMUST00000213337 772 ntBASIC14.17□□□□□ -0.14
Smarce1O54941 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.17□□□□□ -0.14
Smarce1O54941 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.17□□□□□ -0.14
Smarce1O54941 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarce1O54941 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarce1O54941 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarce1O54941 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC14.17□□□□□ -0.14
Smarce1O54941 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarce1O54941 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarce1O54941 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smarce1O54941 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarce1O54941 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarce1O54941 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarce1O54941 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarce1O54941 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarce1O54941 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarce1O54941 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC14.17□□□□□ -0.14
Smarce1O54941 Gm43242-201ENSMUST00000199507 1776 ntBASIC14.17□□□□□ -0.14
Smarce1O54941 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarce1O54941 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC14.16□□□□□ -0.14
Smarce1O54941 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smarce1O54941 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarce1O54941 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarce1O54941 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smarce1O54941 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarce1O54941 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smarce1O54941 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarce1O54941 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC14.16□□□□□ -0.14
Smarce1O54941 AC167669.2-201ENSMUST00000224417 1620 ntBASIC14.16□□□□□ -0.14
Smarce1O54941 Gm2128-201ENSMUST00000108009 2560 ntBASIC14.16□□□□□ -0.14
Smarce1O54941 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarce1O54941 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Smarce1O54941 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.16□□□□□ -0.14
Smarce1O54941 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Smarce1O54941 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.16□□□□□ -0.14
Smarce1O54941 Gm38158-201ENSMUST00000194617 339 ntBASIC14.16□□□□□ -0.14
Smarce1O54941 Gm43118-201ENSMUST00000199149 775 ntBASIC14.16□□□□□ -0.14
Smarce1O54941 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC14.16□□□□□ -0.14
Smarce1O54941 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
Smarce1O54941 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarce1O54941 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smarce1O54941 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Smarce1O54941 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Smarce1O54941 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarce1O54941 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarce1O54941 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarce1O54941 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
Smarce1O54941 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Smarce1O54941 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarce1O54941 Gm45677-201ENSMUST00000209975 1341 ntBASIC14.15□□□□□ -0.14
Smarce1O54941 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarce1O54941 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarce1O54941 Gm8146-201ENSMUST00000192106 1847 ntBASIC14.15□□□□□ -0.14
Smarce1O54941 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarce1O54941 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarce1O54941 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarce1O54941 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarce1O54941 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarce1O54941 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarce1O54941 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarce1O54941 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarce1O54941 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarce1O54941 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarce1O54941 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC14.15□□□□□ -0.14
Smarce1O54941 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.15□□□□□ -0.14
Smarce1O54941 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarce1O54941 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.15□□□□□ -0.14
Smarce1O54941 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Smarce1O54941 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarce1O54941 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.15□□□□□ -0.14
Smarce1O54941 Gm11700-201ENSMUST00000119409 403 ntBASIC14.15□□□□□ -0.14
Smarce1O54941 Gm12164-201ENSMUST00000121695 551 ntBASIC14.15□□□□□ -0.14
Smarce1O54941 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC14.15□□□□□ -0.14
Smarce1O54941 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarce1O54941 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarce1O54941 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC14.15□□□□□ -0.14
Smarce1O54941 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.15□□□□□ -0.14
Smarce1O54941 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.15□□□□□ -0.14
Smarce1O54941 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.15□□□□□ -0.14
Smarce1O54941 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms