Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npc1O35604 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npc1O35604 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npc1O35604 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npc1O35604 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npc1O35604 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npc1O35604 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npc1O35604 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Npc1O35604 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.68□□□□□ -0.54
Npc1O35604 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Npc1O35604 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Npc1O35604 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Npc1O35604 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Npc1O35604 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Npc1O35604 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Npc1O35604 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Npc1O35604 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Npc1O35604 Gm23949-201ENSMUST00000104027 127 ntBASIC11.68□□□□□ -0.54
Npc1O35604 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Npc1O35604 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.68□□□□□ -0.54
Npc1O35604 Gm14208-201ENSMUST00000119645 678 ntBASIC11.68□□□□□ -0.54
Npc1O35604 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.68□□□□□ -0.54
Npc1O35604 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.68□□□□□ -0.54
Npc1O35604 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Npc1O35604 Gm43184-201ENSMUST00000197247 542 ntBASIC11.68□□□□□ -0.54
Npc1O35604 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.68□□□□□ -0.54
Npc1O35604 Gm17827-201ENSMUST00000211825 742 ntBASIC11.68□□□□□ -0.54
Npc1O35604 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Npc1O35604 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Npc1O35604 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Npc1O35604 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.68□□□□□ -0.54
Npc1O35604 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Npc1O35604 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Npc1O35604 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Npc1O35604 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Npc1O35604 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Npc1O35604 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Npc1O35604 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Npc1O35604 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Npc1O35604 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Npc1O35604 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Npc1O35604 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.68□□□□□ -0.54
Npc1O35604 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Npc1O35604 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Npc1O35604 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npc1O35604 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.67□□□□□ -0.54
Npc1O35604 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npc1O35604 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npc1O35604 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npc1O35604 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npc1O35604 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Npc1O35604 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Npc1O35604 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.67□□□□□ -0.54
Npc1O35604 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Npc1O35604 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npc1O35604 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npc1O35604 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Npc1O35604 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npc1O35604 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npc1O35604 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Npc1O35604 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Npc1O35604 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npc1O35604 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npc1O35604 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npc1O35604 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Npc1O35604 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npc1O35604 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.67□□□□□ -0.54
Npc1O35604 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Npc1O35604 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Npc1O35604 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.67□□□□□ -0.54
Npc1O35604 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Npc1O35604 Gm270-201ENSMUST00000223010 976 ntBASIC11.67□□□□□ -0.54
Npc1O35604 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.67□□□□□ -0.54
Npc1O35604 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npc1O35604 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npc1O35604 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npc1O35604 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.67□□□□□ -0.54
Npc1O35604 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Npc1O35604 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Npc1O35604 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Npc1O35604 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npc1O35604 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npc1O35604 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npc1O35604 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npc1O35604 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npc1O35604 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npc1O35604 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npc1O35604 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npc1O35604 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npc1O35604 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npc1O35604 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Npc1O35604 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.66□□□□□ -0.54
Npc1O35604 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npc1O35604 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Npc1O35604 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Npc1O35604 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npc1O35604 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npc1O35604 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.66□□□□□ -0.54
Npc1O35604 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.66□□□□□ -0.54
Npc1O35604 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms