Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Polr1aO35134 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Polr1aO35134 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Polr1aO35134 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Polr1aO35134 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC18.05■□□□□ 0.48
Polr1aO35134 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC18.05■□□□□ 0.48
Polr1aO35134 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Polr1aO35134 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Polr1aO35134 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Polr1aO35134 AC154747.3-201ENSMUST00000224471 3470 ntBASIC18.05■□□□□ 0.48
Polr1aO35134 Gm7224-201ENSMUST00000121359 2066 ntBASIC18.04■□□□□ 0.48
Polr1aO35134 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Polr1aO35134 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Polr1aO35134 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Polr1aO35134 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Polr1aO35134 Gm42433-201ENSMUST00000196806 940 ntBASIC18.04■□□□□ 0.48
Polr1aO35134 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC18.04■□□□□ 0.48
Polr1aO35134 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC18.04■□□□□ 0.48
Polr1aO35134 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC18.04■□□□□ 0.48
Polr1aO35134 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Polr1aO35134 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Polr1aO35134 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Polr1aO35134 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Polr1aO35134 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Polr1aO35134 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Polr1aO35134 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Polr1aO35134 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Polr1aO35134 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Polr1aO35134 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Polr1aO35134 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Polr1aO35134 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Polr1aO35134 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Polr1aO35134 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC18.04■□□□□ 0.48
Polr1aO35134 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Polr1aO35134 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Polr1aO35134 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Polr1aO35134 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Polr1aO35134 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Polr1aO35134 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Polr1aO35134 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Polr1aO35134 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Polr1aO35134 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Polr1aO35134 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Polr1aO35134 Gm9507-202ENSMUST00000180157 654 ntBASIC18.03■□□□□ 0.48
Polr1aO35134 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC18.03■□□□□ 0.48
Polr1aO35134 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Polr1aO35134 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC18.03■□□□□ 0.48
Polr1aO35134 Gm5171-201ENSMUST00000214944 1415 ntBASIC18.03■□□□□ 0.48
Polr1aO35134 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Polr1aO35134 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Polr1aO35134 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Polr1aO35134 Gm43773-201ENSMUST00000198548 2162 ntBASIC18.03■□□□□ 0.48
Polr1aO35134 Gm43760-201ENSMUST00000202120 3015 ntBASIC18.03■□□□□ 0.48
Polr1aO35134 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Polr1aO35134 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Polr1aO35134 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Polr1aO35134 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Polr1aO35134 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Polr1aO35134 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Polr1aO35134 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Polr1aO35134 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Polr1aO35134 Gm13019-201ENSMUST00000120000 276 ntBASIC18.03■□□□□ 0.48
Polr1aO35134 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Polr1aO35134 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Polr1aO35134 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Polr1aO35134 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Polr1aO35134 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC18.03■□□□□ 0.48
Polr1aO35134 AC159002.1-201ENSMUST00000226714 924 ntBASIC18.03■□□□□ 0.48
Polr1aO35134 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Polr1aO35134 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Polr1aO35134 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Polr1aO35134 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Polr1aO35134 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Polr1aO35134 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Polr1aO35134 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Polr1aO35134 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Polr1aO35134 Gm18986-201ENSMUST00000216029 1986 ntBASIC18.02■□□□□ 0.48
Polr1aO35134 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Polr1aO35134 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Polr1aO35134 Gm11619-201ENSMUST00000117474 237 ntBASIC18.02■□□□□ 0.48
Polr1aO35134 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Polr1aO35134 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Polr1aO35134 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Polr1aO35134 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC18.02■□□□□ 0.48
Polr1aO35134 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC18.02■□□□□ 0.48
Polr1aO35134 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC18.02■□□□□ 0.48
Polr1aO35134 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC18.02■□□□□ 0.48
Polr1aO35134 AC122035.1-201ENSMUST00000227576 1016 ntBASIC18.02■□□□□ 0.48
Polr1aO35134 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Polr1aO35134 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Polr1aO35134 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Polr1aO35134 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Polr1aO35134 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Polr1aO35134 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Polr1aO35134 Gm33366-201ENSMUST00000195583 3827 ntBASIC18.02■□□□□ 0.47
Polr1aO35134 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Polr1aO35134 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Polr1aO35134 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Polr1aO35134 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Polr1aO35134 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms