Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx1-1G3UXB3 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx1-1G3UXB3 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx1-1G3UXB3 Gm42721-201ENSMUST00000197165 1523 ntBASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Gm15784-201ENSMUST00000120260 1462 ntBASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Gm13776-201ENSMUST00000122236 1261 ntBASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Gm16026-202ENSMUST00000159695 772 ntBASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Gm6397-201ENSMUST00000161973 1069 ntBASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Gm9116-201ENSMUST00000192400 1018 ntBASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Gm38019-201ENSMUST00000195133 380 ntBASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Gm44329-201ENSMUST00000197469 112 ntBASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Gm18599-201ENSMUST00000206729 1125 ntBASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Gm2875-201ENSMUST00000211333 360 ntBASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Gm19009-201ENSMUST00000223072 823 ntBASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 CT009536.2-201ENSMUST00000225370 665 ntBASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 CT025553.1-201ENSMUST00000226292 299 ntBASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Gm6781-201ENSMUST00000038304 1242 ntBASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Mgat4d-201ENSMUST00000038692 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Gm6430-201ENSMUST00000054664 1248 ntBASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.51□□□□□ -0.09
Nkx1-1G3UXB3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 Gm38344-201ENSMUST00000195306 1353 ntBASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 AC101945.2-201ENSMUST00000227886 1377 ntBASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 Gm21998-201ENSMUST00000117552 1308 ntBASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 Gm13812-201ENSMUST00000118061 1347 ntBASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 Gm13810-201ENSMUST00000118584 1347 ntBASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 Gm43593-201ENSMUST00000198605 1346 ntBASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 Gm43785-201ENSMUST00000201036 1345 ntBASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 Gm12225-201ENSMUST00000117995 298 ntBASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 Gm15616-201ENSMUST00000118662 375 ntBASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 Gm12990-201ENSMUST00000120372 468 ntBASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 Gm14832-201ENSMUST00000121289 322 ntBASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 Gm24845-201ENSMUST00000158034 109 ntBASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 H2-Q3-201ENSMUST00000172583 608 ntBASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 Gm3371-202ENSMUST00000177827 489 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 Gm26092-201ENSMUST00000179798 97 ntBASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 Mir669a-1-201ENSMUST00000180238 97 ntBASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 Gm18296-201ENSMUST00000192475 783 ntBASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 Gm38228-201ENSMUST00000193169 1293 ntBASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 Gm20223-201ENSMUST00000199932 805 ntBASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx1-1G3UXB3 Gm43772-201ENSMUST00000202052 379 ntBASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms