Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NpcdF8VQB8 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NpcdF8VQB8 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NpcdF8VQB8 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NpcdF8VQB8 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
NpcdF8VQB8 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NpcdF8VQB8 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NpcdF8VQB8 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NpcdF8VQB8 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NpcdF8VQB8 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NpcdF8VQB8 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NpcdF8VQB8 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NpcdF8VQB8 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NpcdF8VQB8 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NpcdF8VQB8 Gm6630-201ENSMUST00000119199 454 ntBASIC14.41□□□□□ -0.1
NpcdF8VQB8 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.41□□□□□ -0.1
NpcdF8VQB8 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.41□□□□□ -0.1
NpcdF8VQB8 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC14.41□□□□□ -0.1
NpcdF8VQB8 Gm24844-201ENSMUST00000158679 127 ntBASIC14.41□□□□□ -0.1
NpcdF8VQB8 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NpcdF8VQB8 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
NpcdF8VQB8 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.41□□□□□ -0.1
NpcdF8VQB8 AC129308.3-201ENSMUST00000225652 524 ntBASIC14.41□□□□□ -0.1
NpcdF8VQB8 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NpcdF8VQB8 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
NpcdF8VQB8 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NpcdF8VQB8 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.41□□□□□ -0.1
NpcdF8VQB8 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NpcdF8VQB8 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NpcdF8VQB8 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NpcdF8VQB8 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
NpcdF8VQB8 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
NpcdF8VQB8 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NpcdF8VQB8 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NpcdF8VQB8 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NpcdF8VQB8 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
NpcdF8VQB8 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC14.41□□□□□ -0.1
NpcdF8VQB8 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NpcdF8VQB8 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.4□□□□□ -0.1
NpcdF8VQB8 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NpcdF8VQB8 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NpcdF8VQB8 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NpcdF8VQB8 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
NpcdF8VQB8 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC14.4□□□□□ -0.1
NpcdF8VQB8 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NpcdF8VQB8 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
NpcdF8VQB8 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NpcdF8VQB8 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NpcdF8VQB8 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NpcdF8VQB8 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
NpcdF8VQB8 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NpcdF8VQB8 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NpcdF8VQB8 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NpcdF8VQB8 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NpcdF8VQB8 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC14.4□□□□□ -0.1
NpcdF8VQB8 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
NpcdF8VQB8 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
NpcdF8VQB8 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NpcdF8VQB8 AC166344.1-201ENSMUST00000223745 674 ntBASIC14.4□□□□□ -0.1
NpcdF8VQB8 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NpcdF8VQB8 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
NpcdF8VQB8 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NpcdF8VQB8 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
NpcdF8VQB8 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NpcdF8VQB8 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NpcdF8VQB8 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NpcdF8VQB8 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
NpcdF8VQB8 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.11
NpcdF8VQB8 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NpcdF8VQB8 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NpcdF8VQB8 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NpcdF8VQB8 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.39□□□□□ -0.11
NpcdF8VQB8 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NpcdF8VQB8 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NpcdF8VQB8 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.39□□□□□ -0.11
NpcdF8VQB8 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.39□□□□□ -0.11
NpcdF8VQB8 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NpcdF8VQB8 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NpcdF8VQB8 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NpcdF8VQB8 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
NpcdF8VQB8 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
NpcdF8VQB8 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NpcdF8VQB8 Gm15207-201ENSMUST00000119259 442 ntBASIC14.39□□□□□ -0.11
NpcdF8VQB8 Gm12030-201ENSMUST00000121917 223 ntBASIC14.39□□□□□ -0.11
NpcdF8VQB8 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NpcdF8VQB8 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NpcdF8VQB8 Gm44953-201ENSMUST00000208745 1286 ntBASIC14.39□□□□□ -0.11
NpcdF8VQB8 Gm45758-201ENSMUST00000212448 1006 ntBASIC14.39□□□□□ -0.11
NpcdF8VQB8 CT573086.4-201ENSMUST00000226729 342 ntBASIC14.39□□□□□ -0.11
NpcdF8VQB8 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NpcdF8VQB8 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.39□□□□□ -0.11
NpcdF8VQB8 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NpcdF8VQB8 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NpcdF8VQB8 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
NpcdF8VQB8 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NpcdF8VQB8 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NpcdF8VQB8 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NpcdF8VQB8 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NpcdF8VQB8 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NpcdF8VQB8 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms