Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Colca2F8VPY8 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Colca2F8VPY8 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.24□□□□□ -0.61
Colca2F8VPY8 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Colca2F8VPY8 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Colca2F8VPY8 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.24□□□□□ -0.61
Colca2F8VPY8 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Colca2F8VPY8 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Colca2F8VPY8 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Colca2F8VPY8 Gm11996-201ENSMUST00000117538 915 ntBASIC11.24□□□□□ -0.61
Colca2F8VPY8 Gm15620-201ENSMUST00000122949 270 ntBASIC11.24□□□□□ -0.61
Colca2F8VPY8 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.24□□□□□ -0.61
Colca2F8VPY8 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.24□□□□□ -0.61
Colca2F8VPY8 Gm42430-201ENSMUST00000197209 616 ntBASIC11.24□□□□□ -0.61
Colca2F8VPY8 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Colca2F8VPY8 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Colca2F8VPY8 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Colca2F8VPY8 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC11.24□□□□□ -0.61
Colca2F8VPY8 AC158388.3-202ENSMUST00000225517 775 ntBASIC11.24□□□□□ -0.61
Colca2F8VPY8 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Colca2F8VPY8 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.24□□□□□ -0.61
Colca2F8VPY8 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Colca2F8VPY8 Map1b-203ENSMUST00000223725 2669 ntBASIC11.24□□□□□ -0.61
Colca2F8VPY8 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Colca2F8VPY8 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.24□□□□□ -0.61
Colca2F8VPY8 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Colca2F8VPY8 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Colca2F8VPY8 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Colca2F8VPY8 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Colca2F8VPY8 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Colca2F8VPY8 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Colca2F8VPY8 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Colca2F8VPY8 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.24□□□□□ -0.61
Colca2F8VPY8 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Colca2F8VPY8 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Colca2F8VPY8 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Colca2F8VPY8 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Colca2F8VPY8 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Colca2F8VPY8 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Colca2F8VPY8 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Colca2F8VPY8 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Colca2F8VPY8 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Gm22594-201ENSMUST00000104251 130 ntBASIC11.23□□□□□ -0.61
Colca2F8VPY8 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC11.23□□□□□ -0.61
Colca2F8VPY8 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.23□□□□□ -0.61
Colca2F8VPY8 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Gm25677-201ENSMUST00000174983 72 ntBASIC11.23□□□□□ -0.61
Colca2F8VPY8 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Trav11n-201ENSMUST00000200113 343 ntBASIC11.23□□□□□ -0.61
Colca2F8VPY8 Gm5340-201ENSMUST00000203733 880 ntBASIC11.23□□□□□ -0.61
Colca2F8VPY8 Gm44953-201ENSMUST00000208745 1286 ntBASIC11.23□□□□□ -0.61
Colca2F8VPY8 Gm26670-202ENSMUST00000226862 340 ntBASIC11.23□□□□□ -0.61
Colca2F8VPY8 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Gm8181-201ENSMUST00000062242 669 ntBASIC11.23□□□□□ -0.61
Colca2F8VPY8 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.23□□□□□ -0.61
Colca2F8VPY8 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Colca2F8VPY8 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.23□□□□□ -0.61
Colca2F8VPY8 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.23□□□□□ -0.61
Colca2F8VPY8 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Colca2F8VPY8 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Colca2F8VPY8 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Colca2F8VPY8 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Colca2F8VPY8 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Colca2F8VPY8 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Colca2F8VPY8 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms