Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 Gm15004-201ENSMUST00000119192 630 ntBASIC11.82□□□□□ -0.52
Srp54bE9PXC0 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 Mir6546-201ENSMUST00000184460 62 ntBASIC11.82□□□□□ -0.52
Srp54bE9PXC0 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 Gm45575-201ENSMUST00000210283 548 ntBASIC11.82□□□□□ -0.52
Srp54bE9PXC0 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.82□□□□□ -0.52
Srp54bE9PXC0 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 Gm10179-201ENSMUST00000086233 688 ntBASIC11.82□□□□□ -0.52
Srp54bE9PXC0 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Srp54bE9PXC0 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.81□□□□□ -0.52
Srp54bE9PXC0 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.81□□□□□ -0.52
Srp54bE9PXC0 AC122876.1-201ENSMUST00000217619 825 ntBASIC11.81□□□□□ -0.52
Srp54bE9PXC0 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.81□□□□□ -0.52
Srp54bE9PXC0 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Srp54bE9PXC0 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms