Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Gm3543D3Z235 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3543D3Z235 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Gm3543D3Z235 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.87□□□□□ -0.67
Gm3543D3Z235 Gm24934-201ENSMUST00000103764 111 ntBASIC10.87□□□□□ -0.67
Gm3543D3Z235 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Gm3543D3Z235 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Gm3543D3Z235 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC10.87□□□□□ -0.67
Gm3543D3Z235 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3543D3Z235 Gm14644-201ENSMUST00000116671 647 ntBASIC10.87□□□□□ -0.67
Gm3543D3Z235 Gm13996-201ENSMUST00000118456 430 ntBASIC10.87□□□□□ -0.67
Gm3543D3Z235 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC10.87□□□□□ -0.67
Gm3543D3Z235 Gm45598-202ENSMUST00000210719 986 ntBASIC10.87□□□□□ -0.67
Gm3543D3Z235 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Gm3543D3Z235 Gm9996-201ENSMUST00000070359 913 ntBASIC10.87□□□□□ -0.67
Gm3543D3Z235 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3543D3Z235 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3543D3Z235 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3543D3Z235 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.87□□□□□ -0.67
Gm3543D3Z235 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3543D3Z235 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Gm3543D3Z235 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Gm3543D3Z235 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.87□□□□□ -0.67
Gm3543D3Z235 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.87□□□□□ -0.67
Gm3543D3Z235 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3543D3Z235 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3543D3Z235 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3543D3Z235 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3543D3Z235 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.87□□□□□ -0.67
Gm3543D3Z235 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3543D3Z235 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Gm3543D3Z235 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.87□□□□□ -0.67
Gm3543D3Z235 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3543D3Z235 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3543D3Z235 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.86□□□□□ -0.67
Gm3543D3Z235 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.86□□□□□ -0.67
Gm3543D3Z235 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.86□□□□□ -0.67
Gm3543D3Z235 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.86□□□□□ -0.67
Gm3543D3Z235 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3543D3Z235 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3543D3Z235 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC10.86□□□□□ -0.67
Gm3543D3Z235 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Gm24990-201ENSMUST00000157406 323 ntBASIC10.86□□□□□ -0.67
Gm3543D3Z235 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Gm42937-201ENSMUST00000197360 752 ntBASIC10.86□□□□□ -0.67
Gm3543D3Z235 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.86□□□□□ -0.67
Gm3543D3Z235 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.86□□□□□ -0.67
Gm3543D3Z235 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Mettl6-204ENSMUST00000227595 1027 ntBASIC10.86□□□□□ -0.67
Gm3543D3Z235 Gm8385-201ENSMUST00000058999 643 ntBASIC10.86□□□□□ -0.67
Gm3543D3Z235 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC10.86□□□□□ -0.67
Gm3543D3Z235 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3543D3Z235 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.86□□□□□ -0.67
Gm3543D3Z235 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3543D3Z235 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.85□□□□□ -0.67
Gm3543D3Z235 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3543D3Z235 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms