Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC10.73□□□□□ -0.69
Shank1D3YZU1 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Gm8531-201ENSMUST00000188319 893 ntBASIC10.73□□□□□ -0.69
Shank1D3YZU1 Gm8956-201ENSMUST00000203939 825 ntBASIC10.73□□□□□ -0.69
Shank1D3YZU1 AC154257.1-202ENSMUST00000224729 843 ntBASIC10.73□□□□□ -0.69
Shank1D3YZU1 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Gm25201-201ENSMUST00000083093 170 ntBASIC10.73□□□□□ -0.69
Shank1D3YZU1 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
Shank1D3YZU1 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Ntrk2-209ENSMUST00000225950 2640 ntBASIC10.73□□□□□ -0.69
Shank1D3YZU1 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Shank1D3YZU1 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Shank1D3YZU1 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Gm17213-201ENSMUST00000165161 1360 ntBASIC10.72□□□□□ -0.69
Shank1D3YZU1 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Ighv5-11-201ENSMUST00000193354 371 ntBASIC10.72□□□□□ -0.69
Shank1D3YZU1 Gm45410-201ENSMUST00000211331 1093 ntBASIC10.72□□□□□ -0.69
Shank1D3YZU1 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shank1D3YZU1 CT009489.1-201ENSMUST00000227740 1893 ntBASIC10.72□□□□□ -0.69
Shank1D3YZU1 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.72□□□□□ -0.69
Shank1D3YZU1 Gm15784-201ENSMUST00000120260 1462 ntBASIC10.72□□□□□ -0.69
Shank1D3YZU1 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shank1D3YZU1 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Shank1D3YZU1 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC10.72□□□□□ -0.69
Shank1D3YZU1 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Gm5714-201ENSMUST00000197343 566 ntBASIC10.72□□□□□ -0.69
Shank1D3YZU1 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Gm18204-201ENSMUST00000209835 793 ntBASIC10.72□□□□□ -0.69
Shank1D3YZU1 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shank1D3YZU1 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.71□□□□□ -0.69
Shank1D3YZU1 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Shank1D3YZU1 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shank1D3YZU1 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shank1D3YZU1 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shank1D3YZU1 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC10.71□□□□□ -0.69
Shank1D3YZU1 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.71□□□□□ -0.69
Shank1D3YZU1 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shank1D3YZU1 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shank1D3YZU1 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shank1D3YZU1 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Shank1D3YZU1 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shank1D3YZU1 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.71□□□□□ -0.69
Shank1D3YZU1 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shank1D3YZU1 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shank1D3YZU1 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shank1D3YZU1 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shank1D3YZU1 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shank1D3YZU1 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
Shank1D3YZU1 Gm11949-201ENSMUST00000117640 372 ntBASIC10.71□□□□□ -0.69
Shank1D3YZU1 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms