Protein–RNA interactions for Protein: B2KF05

Brpf3, Bromodomain and PHD finger-containing, 3, mousemouse

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brpf3B2KF05 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Brpf3B2KF05 Gm44415-201ENSMUST00000204151 2112 ntBASIC13.25□□□□□ -0.29
Brpf3B2KF05 Gm43622-201ENSMUST00000200140 2019 ntBASIC13.25□□□□□ -0.29
Brpf3B2KF05 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Brpf3B2KF05 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Brpf3B2KF05 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Brpf3B2KF05 Gm6211-201ENSMUST00000147973 4275 ntBASIC13.25□□□□□ -0.29
Brpf3B2KF05 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Brpf3B2KF05 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brpf3B2KF05 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brpf3B2KF05 Gm29358-202ENSMUST00000187941 3227 ntBASIC13.24□□□□□ -0.29
Brpf3B2KF05 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brpf3B2KF05 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
Brpf3B2KF05 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Brpf3B2KF05 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
Brpf3B2KF05 AC159195.3-201ENSMUST00000225162 2211 ntBASIC13.24□□□□□ -0.29
Brpf3B2KF05 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brpf3B2KF05 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC13.24□□□□□ -0.29
Brpf3B2KF05 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Brpf3B2KF05 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brpf3B2KF05 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brpf3B2KF05 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Brpf3B2KF05 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brpf3B2KF05 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brpf3B2KF05 Gm10548-201ENSMUST00000097631 2629 ntBASIC13.24□□□□□ -0.29
Brpf3B2KF05 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Brpf3B2KF05 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Brpf3B2KF05 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brpf3B2KF05 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.24□□□□□ -0.29
Brpf3B2KF05 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.24□□□□□ -0.29
Brpf3B2KF05 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.24□□□□□ -0.29
Brpf3B2KF05 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.24□□□□□ -0.29
Brpf3B2KF05 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Brpf3B2KF05 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.24□□□□□ -0.29
Brpf3B2KF05 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.24□□□□□ -0.29
Brpf3B2KF05 Gm18584-201ENSMUST00000203098 964 ntBASIC13.24□□□□□ -0.29
Brpf3B2KF05 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.24□□□□□ -0.29
Brpf3B2KF05 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.24□□□□□ -0.29
Brpf3B2KF05 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brpf3B2KF05 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.24□□□□□ -0.29
Brpf3B2KF05 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Brpf3B2KF05 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Brpf3B2KF05 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Brpf3B2KF05 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brpf3B2KF05 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Brpf3B2KF05 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brpf3B2KF05 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brpf3B2KF05 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Brpf3B2KF05 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC13.24□□□□□ -0.29
Brpf3B2KF05 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Brpf3B2KF05 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brpf3B2KF05 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Brpf3B2KF05 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC13.24□□□□□ -0.29
Brpf3B2KF05 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brpf3B2KF05 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Brpf3B2KF05 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brpf3B2KF05 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brpf3B2KF05 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brpf3B2KF05 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brpf3B2KF05 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Brpf3B2KF05 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brpf3B2KF05 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brpf3B2KF05 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brpf3B2KF05 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Brpf3B2KF05 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brpf3B2KF05 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brpf3B2KF05 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brpf3B2KF05 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brpf3B2KF05 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brpf3B2KF05 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brpf3B2KF05 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Brpf3B2KF05 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.23□□□□□ -0.29
Brpf3B2KF05 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brpf3B2KF05 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC13.23□□□□□ -0.29
Brpf3B2KF05 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brpf3B2KF05 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.23□□□□□ -0.29
Brpf3B2KF05 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Brpf3B2KF05 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Brpf3B2KF05 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Brpf3B2KF05 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Brpf3B2KF05 Lect2-202ENSMUST00000225183 823 ntBASIC13.23□□□□□ -0.29
Brpf3B2KF05 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brpf3B2KF05 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brpf3B2KF05 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brpf3B2KF05 Gm6091-201ENSMUST00000098307 165 ntBASIC13.23□□□□□ -0.29
Brpf3B2KF05 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Brpf3B2KF05 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brpf3B2KF05 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Brpf3B2KF05 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Brpf3B2KF05 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brpf3B2KF05 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Brpf3B2KF05 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brpf3B2KF05 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brpf3B2KF05 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brpf3B2KF05 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brpf3B2KF05 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brpf3B2KF05 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brpf3B2KF05 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Brpf3B2KF05 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Brpf3B2KF05 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms