Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.64□□□□□ -0.23
Ccdc112A0AUP1 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.64□□□□□ -0.23
Ccdc112A0AUP1 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc112A0AUP1 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.64□□□□□ -0.23
Ccdc112A0AUP1 Morn2-202ENSMUST00000227729 656 ntBASIC13.64□□□□□ -0.23
Ccdc112A0AUP1 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
Ccdc112A0AUP1 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc112A0AUP1 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc112A0AUP1 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc112A0AUP1 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc112A0AUP1 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.64□□□□□ -0.23
Ccdc112A0AUP1 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ccdc112A0AUP1 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc112A0AUP1 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ccdc112A0AUP1 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc112A0AUP1 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc112A0AUP1 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc112A0AUP1 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Ccdc112A0AUP1 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc112A0AUP1 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc112A0AUP1 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc112A0AUP1 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc112A0AUP1 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ccdc112A0AUP1 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc112A0AUP1 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.64□□□□□ -0.23
Ccdc112A0AUP1 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 Gm7722-201ENSMUST00000120646 741 ntBASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 Gm13786-201ENSMUST00000122371 333 ntBASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 Gm18893-201ENSMUST00000198416 943 ntBASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 Gm7046-201ENSMUST00000221351 977 ntBASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc112A0AUP1 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Gm38114-201ENSMUST00000191877 1232 ntBASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Gm43242-201ENSMUST00000199507 1776 ntBASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms