Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm45089-201ENSMUST00000208082 2040 ntBASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm12742-201ENSMUST00000117326 410 ntBASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm23363-201ENSMUST00000175024 79 ntBASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm5370-201ENSMUST00000187187 574 ntBASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 AY702102-202ENSMUST00000194651 1173 ntBASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Trav6n-6A0A075B6B2 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm12291-201ENSMUST00000121627 311 ntBASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm8565-201ENSMUST00000183259 1014 ntBASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm27682-201ENSMUST00000183930 110 ntBASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm5620-201ENSMUST00000077991 1348 ntBASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav6n-6A0A075B6B2 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC8.93□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms