Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.79□□□□□ -0.68
H2afb3S4R1G7 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Gm28882-201ENSMUST00000185504 314 ntBASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Gm42937-201ENSMUST00000197360 752 ntBASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Gm18711-201ENSMUST00000199341 750 ntBASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.79□□□□□ -0.68
H2afb3S4R1G7 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 AC123738.2-201ENSMUST00000223791 1899 ntBASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Gm13316-201ENSMUST00000140537 691 ntBASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
H2afb3S4R1G7 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
H2afb3S4R1G7 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
H2afb3S4R1G7 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
H2afb3S4R1G7 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
H2afb3S4R1G7 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.77□□□□□ -0.68
H2afb3S4R1G7 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
H2afb3S4R1G7 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
H2afb3S4R1G7 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
H2afb3S4R1G7 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
H2afb3S4R1G7 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms