Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cldn9Q9Z0S7 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cldn9Q9Z0S7 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.51□□□□□ -0.57
Cldn9Q9Z0S7 Cts7-204ENSMUST00000225321 1257 ntBASIC11.51□□□□□ -0.57
Cldn9Q9Z0S7 Gzmn-202ENSMUST00000225535 989 ntBASIC11.51□□□□□ -0.57
Cldn9Q9Z0S7 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.51□□□□□ -0.57
Cldn9Q9Z0S7 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cldn9Q9Z0S7 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.51□□□□□ -0.57
Cldn9Q9Z0S7 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.51□□□□□ -0.57
Cldn9Q9Z0S7 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.51□□□□□ -0.57
Cldn9Q9Z0S7 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cldn9Q9Z0S7 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cldn9Q9Z0S7 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.51□□□□□ -0.57
Cldn9Q9Z0S7 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cldn9Q9Z0S7 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cldn9Q9Z0S7 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.51□□□□□ -0.57
Cldn9Q9Z0S7 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.51□□□□□ -0.57
Cldn9Q9Z0S7 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cldn9Q9Z0S7 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cldn9Q9Z0S7 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cldn9Q9Z0S7 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cldn9Q9Z0S7 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cldn9Q9Z0S7 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cldn9Q9Z0S7 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cldn9Q9Z0S7 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cldn9Q9Z0S7 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cldn9Q9Z0S7 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.51□□□□□ -0.57
Cldn9Q9Z0S7 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Gm43630-201ENSMUST00000201550 776 ntBASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Gm45598-202ENSMUST00000210719 986 ntBASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cldn9Q9Z0S7 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Gm14441-201ENSMUST00000121960 540 ntBASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cldn9Q9Z0S7 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms