Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Gm14028-201ENSMUST00000117434 479 ntBASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Gm15207-201ENSMUST00000119259 442 ntBASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Gm27552-201ENSMUST00000183351 62 ntBASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Gm27844-201ENSMUST00000183613 62 ntBASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Gm5714-201ENSMUST00000197343 566 ntBASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 AU022133-201ENSMUST00000200601 873 ntBASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Gm7940-201ENSMUST00000218195 769 ntBASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubd1Q9R1K7 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 Gm11663-201ENSMUST00000117888 290 ntBASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 Gm25881-201ENSMUST00000157783 103 ntBASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 Lect2-202ENSMUST00000225183 823 ntBASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Tubd1Q9R1K7 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubd1Q9R1K7 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Tubd1Q9R1K7 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tubd1Q9R1K7 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.1□□□□□ -0.47
Tubd1Q9R1K7 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubd1Q9R1K7 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tubd1Q9R1K7 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubd1Q9R1K7 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubd1Q9R1K7 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubd1Q9R1K7 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.1□□□□□ -0.47
Tubd1Q9R1K7 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Tubd1Q9R1K7 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Tubd1Q9R1K7 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
Tubd1Q9R1K7 Gm15515-201ENSMUST00000117827 822 ntBASIC12.1□□□□□ -0.47
Tubd1Q9R1K7 Gm7857-201ENSMUST00000117957 358 ntBASIC12.1□□□□□ -0.47
Tubd1Q9R1K7 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.1□□□□□ -0.47
Tubd1Q9R1K7 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubd1Q9R1K7 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Tubd1Q9R1K7 Gm24990-201ENSMUST00000157406 323 ntBASIC12.1□□□□□ -0.47
Tubd1Q9R1K7 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.1□□□□□ -0.47
Tubd1Q9R1K7 Gm8815-201ENSMUST00000173809 620 ntBASIC12.1□□□□□ -0.47
Tubd1Q9R1K7 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Tubd1Q9R1K7 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Tubd1Q9R1K7 Gm8100-201ENSMUST00000182906 988 ntBASIC12.1□□□□□ -0.47
Tubd1Q9R1K7 Gm28686-201ENSMUST00000187404 609 ntBASIC12.1□□□□□ -0.47
Tubd1Q9R1K7 Gm43002-201ENSMUST00000200310 155 ntBASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 217.8 ms