Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpne8Q9DC53 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Cpne8Q9DC53 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cpne8Q9DC53 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpne8Q9DC53 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cpne8Q9DC53 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpne8Q9DC53 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpne8Q9DC53 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cpne8Q9DC53 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpne8Q9DC53 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpne8Q9DC53 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cpne8Q9DC53 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpne8Q9DC53 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cpne8Q9DC53 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpne8Q9DC53 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.44□□□□□ -0.42
Cpne8Q9DC53 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cpne8Q9DC53 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpne8Q9DC53 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.43□□□□□ -0.42
Cpne8Q9DC53 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Gm27046-201ENSMUST00000182160 463 ntBASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Gm5186-201ENSMUST00000218781 920 ntBASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms