Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3a3Q9D554 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sf3a3Q9D554 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3a3Q9D554 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3a3Q9D554 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.06□□□□□ -0.48
Sf3a3Q9D554 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Gm12384-201ENSMUST00000119228 919 ntBASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Gm13369-201ENSMUST00000119442 987 ntBASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Syt7-204ENSMUST00000223586 1344 ntBASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3a3Q9D554 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 BC043934-202ENSMUST00000185694 2356 ntBASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Gm37042-201ENSMUST00000193816 581 ntBASIC12.05□□□□□ -0.48
Sf3a3Q9D554 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Gm24136-201ENSMUST00000083374 165 ntBASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.05□□□□□ -0.48
Sf3a3Q9D554 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3a3Q9D554 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms