Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Stag1Q9D3E6 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Stag1Q9D3E6 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Stag1Q9D3E6 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Stag1Q9D3E6 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Stag1Q9D3E6 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Stag1Q9D3E6 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Stag1Q9D3E6 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Stag1Q9D3E6 Gm14193-201ENSMUST00000105067 153 ntBASIC14.27□□□□□ -0.13
Stag1Q9D3E6 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Stag1Q9D3E6 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Stag1Q9D3E6 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Stag1Q9D3E6 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Stag1Q9D3E6 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Stag1Q9D3E6 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC14.27□□□□□ -0.13
Stag1Q9D3E6 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC14.27□□□□□ -0.13
Stag1Q9D3E6 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Stag1Q9D3E6 Gm9463-201ENSMUST00000206707 601 ntBASIC14.27□□□□□ -0.13
Stag1Q9D3E6 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC14.27□□□□□ -0.13
Stag1Q9D3E6 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Stag1Q9D3E6 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Stag1Q9D3E6 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Stag1Q9D3E6 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Stag1Q9D3E6 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Stag1Q9D3E6 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Stag1Q9D3E6 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Stag1Q9D3E6 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Stag1Q9D3E6 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Stag1Q9D3E6 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Stag1Q9D3E6 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Stag1Q9D3E6 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Stag1Q9D3E6 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Stag1Q9D3E6 CT009757.3-201ENSMUST00000223367 2320 ntBASIC14.26□□□□□ -0.13
Stag1Q9D3E6 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Stag1Q9D3E6 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.26□□□□□ -0.13
Stag1Q9D3E6 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Stag1Q9D3E6 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Stag1Q9D3E6 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Stag1Q9D3E6 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Stag1Q9D3E6 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Stag1Q9D3E6 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Stag1Q9D3E6 Gm8731-201ENSMUST00000118088 412 ntBASIC14.26□□□□□ -0.13
Stag1Q9D3E6 Gm15352-201ENSMUST00000118696 270 ntBASIC14.26□□□□□ -0.13
Stag1Q9D3E6 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC14.26□□□□□ -0.13
Stag1Q9D3E6 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC14.26□□□□□ -0.13
Stag1Q9D3E6 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Stag1Q9D3E6 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Stag1Q9D3E6 Gm9034-201ENSMUST00000182071 1005 ntBASIC14.26□□□□□ -0.13
Stag1Q9D3E6 Gm8365-201ENSMUST00000197334 648 ntBASIC14.26□□□□□ -0.13
Stag1Q9D3E6 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC14.26□□□□□ -0.13
Stag1Q9D3E6 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC14.26□□□□□ -0.13
Stag1Q9D3E6 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Stag1Q9D3E6 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Stag1Q9D3E6 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Stag1Q9D3E6 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Stag1Q9D3E6 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Stag1Q9D3E6 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Stag1Q9D3E6 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Stag1Q9D3E6 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Stag1Q9D3E6 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Stag1Q9D3E6 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Stag1Q9D3E6 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC14.26□□□□□ -0.13
Stag1Q9D3E6 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Stag1Q9D3E6 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Stag1Q9D3E6 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Stag1Q9D3E6 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Stag1Q9D3E6 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Stag1Q9D3E6 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Stag1Q9D3E6 Gm29100-201ENSMUST00000187564 4410 ntBASIC14.25□□□□□ -0.13
Stag1Q9D3E6 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Stag1Q9D3E6 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Stag1Q9D3E6 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Stag1Q9D3E6 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Stag1Q9D3E6 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Stag1Q9D3E6 Gm7537-201ENSMUST00000221660 1414 ntBASIC14.25□□□□□ -0.13
Stag1Q9D3E6 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Stag1Q9D3E6 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Stag1Q9D3E6 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Stag1Q9D3E6 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Stag1Q9D3E6 Gm37348-201ENSMUST00000193104 1789 ntBASIC14.25□□□□□ -0.13
Stag1Q9D3E6 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Stag1Q9D3E6 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Stag1Q9D3E6 Gm22920-201ENSMUST00000102175 109 ntBASIC14.25□□□□□ -0.13
Stag1Q9D3E6 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Stag1Q9D3E6 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC14.25□□□□□ -0.13
Stag1Q9D3E6 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC14.25□□□□□ -0.13
Stag1Q9D3E6 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Stag1Q9D3E6 Gm9540-201ENSMUST00000188230 478 ntBASIC14.25□□□□□ -0.13
Stag1Q9D3E6 Gm29499-201ENSMUST00000189151 486 ntBASIC14.25□□□□□ -0.13
Stag1Q9D3E6 Gm28329-201ENSMUST00000191208 689 ntBASIC14.25□□□□□ -0.13
Stag1Q9D3E6 Gm29171-201ENSMUST00000191397 486 ntBASIC14.25□□□□□ -0.13
Stag1Q9D3E6 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC14.25□□□□□ -0.13
Stag1Q9D3E6 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Stag1Q9D3E6 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC14.25□□□□□ -0.13
Stag1Q9D3E6 Snora73b-201ENSMUST00000083419 205 ntBASIC14.25□□□□□ -0.13
Stag1Q9D3E6 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Stag1Q9D3E6 Gm43321-201ENSMUST00000198897 2409 ntBASIC14.25□□□□□ -0.13
Stag1Q9D3E6 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Stag1Q9D3E6 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Stag1Q9D3E6 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms