Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chaf1bQ9D0N7 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 Gm27892-201ENSMUST00000185017 106 ntBASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 Gm45925-201ENSMUST00000218882 744 ntBASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chaf1bQ9D0N7 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 Gm11814-201ENSMUST00000119515 929 ntBASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 Gm9136-201ENSMUST00000193368 454 ntBASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 Gm17794-201ENSMUST00000220252 955 ntBASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 Gm10076-201ENSMUST00000073238 384 ntBASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chaf1bQ9D0N7 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chaf1bQ9D0N7 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.21□□□□□ -0.62
Chaf1bQ9D0N7 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.21□□□□□ -0.62
Chaf1bQ9D0N7 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Chaf1bQ9D0N7 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chaf1bQ9D0N7 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chaf1bQ9D0N7 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chaf1bQ9D0N7 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.62
Chaf1bQ9D0N7 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Chaf1bQ9D0N7 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.21□□□□□ -0.62
Chaf1bQ9D0N7 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Chaf1bQ9D0N7 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.21□□□□□ -0.62
Chaf1bQ9D0N7 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Chaf1bQ9D0N7 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.2□□□□□ -0.62
Chaf1bQ9D0N7 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Chaf1bQ9D0N7 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Chaf1bQ9D0N7 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms