Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Gm43433-201ENSMUST00000196573 481 ntBASIC12.32□□□□□ -0.44
Snf8Q9CZ28 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.32□□□□□ -0.44
Snf8Q9CZ28 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.32□□□□□ -0.44
Snf8Q9CZ28 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snf8Q9CZ28 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snf8Q9CZ28 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.31□□□□□ -0.44
Snf8Q9CZ28 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Snf8Q9CZ28 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Snf8Q9CZ28 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snf8Q9CZ28 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snf8Q9CZ28 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snf8Q9CZ28 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.31□□□□□ -0.44
Snf8Q9CZ28 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.31□□□□□ -0.44
Snf8Q9CZ28 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snf8Q9CZ28 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snf8Q9CZ28 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Snf8Q9CZ28 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Snf8Q9CZ28 Gm13875-201ENSMUST00000120162 282 ntBASIC12.31□□□□□ -0.44
Snf8Q9CZ28 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Snf8Q9CZ28 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Snf8Q9CZ28 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.31□□□□□ -0.44
Snf8Q9CZ28 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snf8Q9CZ28 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snf8Q9CZ28 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Snf8Q9CZ28 Snora73a-201ENSMUST00000082453 205 ntBASIC12.31□□□□□ -0.44
Snf8Q9CZ28 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.31□□□□□ -0.44
Snf8Q9CZ28 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snf8Q9CZ28 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snf8Q9CZ28 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snf8Q9CZ28 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Snf8Q9CZ28 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.31□□□□□ -0.44
Snf8Q9CZ28 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snf8Q9CZ28 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.31□□□□□ -0.44
Snf8Q9CZ28 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Snf8Q9CZ28 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snf8Q9CZ28 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snf8Q9CZ28 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snf8Q9CZ28 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Snf8Q9CZ28 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snf8Q9CZ28 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snf8Q9CZ28 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snf8Q9CZ28 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Snf8Q9CZ28 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.3□□□□□ -0.44
Snf8Q9CZ28 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Snf8Q9CZ28 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Snf8Q9CZ28 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Snf8Q9CZ28 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Snf8Q9CZ28 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Snf8Q9CZ28 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Snf8Q9CZ28 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Snf8Q9CZ28 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.3□□□□□ -0.44
Snf8Q9CZ28 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.3□□□□□ -0.44
Snf8Q9CZ28 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Snf8Q9CZ28 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Snf8Q9CZ28 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Snf8Q9CZ28 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Snf8Q9CZ28 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.3□□□□□ -0.44
Snf8Q9CZ28 Gm15610-201ENSMUST00000120584 195 ntBASIC12.3□□□□□ -0.44
Snf8Q9CZ28 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Snf8Q9CZ28 Gm28882-201ENSMUST00000185504 314 ntBASIC12.3□□□□□ -0.44
Snf8Q9CZ28 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Snf8Q9CZ28 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Snf8Q9CZ28 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.3□□□□□ -0.44
Snf8Q9CZ28 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.3□□□□□ -0.44
Snf8Q9CZ28 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.3□□□□□ -0.44
Snf8Q9CZ28 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Snf8Q9CZ28 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Snf8Q9CZ28 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Snf8Q9CZ28 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Snf8Q9CZ28 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Snf8Q9CZ28 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Snf8Q9CZ28 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Snf8Q9CZ28 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.3□□□□□ -0.44
Snf8Q9CZ28 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.3□□□□□ -0.44
Snf8Q9CZ28 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Snf8Q9CZ28 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Snf8Q9CZ28 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms