Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nkd1Q99MH6 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nkd1Q99MH6 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nkd1Q99MH6 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.27□□□□□ -0.6
Nkd1Q99MH6 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Nkd1Q99MH6 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Nkd1Q99MH6 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.27□□□□□ -0.6
Nkd1Q99MH6 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nkd1Q99MH6 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nkd1Q99MH6 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nkd1Q99MH6 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.27□□□□□ -0.6
Nkd1Q99MH6 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.27□□□□□ -0.6
Nkd1Q99MH6 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.27□□□□□ -0.6
Nkd1Q99MH6 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Nkd1Q99MH6 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Nkd1Q99MH6 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.27□□□□□ -0.6
Nkd1Q99MH6 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkd1Q99MH6 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkd1Q99MH6 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nkd1Q99MH6 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkd1Q99MH6 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkd1Q99MH6 Mir1247-201ENSMUST00000116706 82 ntBASIC11.27□□□□□ -0.61
Nkd1Q99MH6 Gm13226-201ENSMUST00000117838 404 ntBASIC11.27□□□□□ -0.61
Nkd1Q99MH6 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.27□□□□□ -0.61
Nkd1Q99MH6 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.27□□□□□ -0.61
Nkd1Q99MH6 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nkd1Q99MH6 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.27□□□□□ -0.61
Nkd1Q99MH6 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.27□□□□□ -0.61
Nkd1Q99MH6 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.27□□□□□ -0.61
Nkd1Q99MH6 Gm28882-201ENSMUST00000185504 314 ntBASIC11.27□□□□□ -0.61
Nkd1Q99MH6 Gm42693-201ENSMUST00000196779 631 ntBASIC11.27□□□□□ -0.61
Nkd1Q99MH6 AC073947.1-201ENSMUST00000216991 649 ntBASIC11.27□□□□□ -0.61
Nkd1Q99MH6 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nkd1Q99MH6 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.27□□□□□ -0.61
Nkd1Q99MH6 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkd1Q99MH6 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkd1Q99MH6 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkd1Q99MH6 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkd1Q99MH6 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkd1Q99MH6 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkd1Q99MH6 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkd1Q99MH6 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Nkd1Q99MH6 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkd1Q99MH6 Gm13615-201ENSMUST00000120242 1612 ntBASIC11.27□□□□□ -0.61
Nkd1Q99MH6 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.27□□□□□ -0.61
Nkd1Q99MH6 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Nkd1Q99MH6 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nkd1Q99MH6 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nkd1Q99MH6 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Nkd1Q99MH6 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.27□□□□□ -0.61
Nkd1Q99MH6 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nkd1Q99MH6 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.26□□□□□ -0.61
Nkd1Q99MH6 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Gm5370-201ENSMUST00000187187 574 ntBASIC11.26□□□□□ -0.61
Nkd1Q99MH6 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd1Q99MH6 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 106 ms