Protein–RNA interactions for Protein: Q99LJ0

Cttnbp2nl, CTTNBP2 N-terminal-like protein, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nlQ99LJ0 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cttnbp2nlQ99LJ0 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cttnbp2nlQ99LJ0 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cttnbp2nlQ99LJ0 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Cttnbp2nlQ99LJ0 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cttnbp2nlQ99LJ0 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cttnbp2nlQ99LJ0 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cttnbp2nlQ99LJ0 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cttnbp2nlQ99LJ0 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cttnbp2nlQ99LJ0 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cttnbp2nlQ99LJ0 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Cttnbp2nlQ99LJ0 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Gm44405-201ENSMUST00000198952 126 ntBASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Rgr-203ENSMUST00000225070 4704 ntBASIC12.11□□□□□ -0.47
Cttnbp2nlQ99LJ0 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Gm27847-201ENSMUST00000183711 107 ntBASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Gm27375-201ENSMUST00000183799 107 ntBASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Gm45925-201ENSMUST00000218882 744 ntBASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cttnbp2nlQ99LJ0 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cttnbp2nlQ99LJ0 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.09□□□□□ -0.47
Cttnbp2nlQ99LJ0 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.09□□□□□ -0.47
Cttnbp2nlQ99LJ0 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cttnbp2nlQ99LJ0 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cttnbp2nlQ99LJ0 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms