Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.62□□□□□ -0.39
Clp1Q99LI9 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Gm12816-201ENSMUST00000118069 1212 ntBASIC12.62□□□□□ -0.39
Clp1Q99LI9 Gm11422-201ENSMUST00000118925 1103 ntBASIC12.62□□□□□ -0.39
Clp1Q99LI9 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC12.62□□□□□ -0.39
Clp1Q99LI9 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.62□□□□□ -0.39
Clp1Q99LI9 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC12.62□□□□□ -0.39
Clp1Q99LI9 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.62□□□□□ -0.39
Clp1Q99LI9 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.62□□□□□ -0.39
Clp1Q99LI9 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Gm35638-201ENSMUST00000220724 652 ntBASIC12.62□□□□□ -0.39
Clp1Q99LI9 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Gm8325-201ENSMUST00000099086 453 ntBASIC12.62□□□□□ -0.39
Clp1Q99LI9 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Clp1Q99LI9 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Clp1Q99LI9 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clp1Q99LI9 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Gm15615-201ENSMUST00000118876 198 ntBASIC12.61□□□□□ -0.39
Clp1Q99LI9 Gm9089-201ENSMUST00000122027 526 ntBASIC12.61□□□□□ -0.39
Clp1Q99LI9 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Gm35713-201ENSMUST00000210516 199 ntBASIC12.61□□□□□ -0.39
Clp1Q99LI9 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Clp1Q99LI9 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clp1Q99LI9 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.61□□□□□ -0.39
Clp1Q99LI9 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.61□□□□□ -0.39
Clp1Q99LI9 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Clp1Q99LI9 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms