Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Lims1Q99JW4 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.92□□□□□ -0.66
Lims1Q99JW4 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.91□□□□□ -0.66
Lims1Q99JW4 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.91□□□□□ -0.66
Lims1Q99JW4 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.91□□□□□ -0.66
Lims1Q99JW4 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lims1Q99JW4 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Gm43133-201ENSMUST00000197472 463 ntBASIC10.91□□□□□ -0.66
Lims1Q99JW4 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Gm6013-201ENSMUST00000212264 699 ntBASIC10.91□□□□□ -0.66
Lims1Q99JW4 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lims1Q99JW4 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Lims1Q99JW4 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Gm11700-201ENSMUST00000119409 403 ntBASIC10.9□□□□□ -0.66
Lims1Q99JW4 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Gm27572-201ENSMUST00000183702 255 ntBASIC10.9□□□□□ -0.66
Lims1Q99JW4 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC10.9□□□□□ -0.66
Lims1Q99JW4 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.9□□□□□ -0.66
Lims1Q99JW4 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.9□□□□□ -0.66
Lims1Q99JW4 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Lims1Q99JW4 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Lect2-202ENSMUST00000225183 823 ntBASIC10.9□□□□□ -0.66
Lims1Q99JW4 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Lims1Q99JW4 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms