Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdha8Q91Y12 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Gm12015-201ENSMUST00000117065 843 ntBASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Gm27046-201ENSMUST00000182160 463 ntBASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Gm9230-201ENSMUST00000188228 532 ntBASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdha8Q91Y12 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.66□□□□□ -0.54
Pcdha8Q91Y12 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdha8Q91Y12 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdha8Q91Y12 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdha8Q91Y12 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdha8Q91Y12 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdha8Q91Y12 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Pcdha8Q91Y12 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.66□□□□□ -0.54
Pcdha8Q91Y12 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdha8Q91Y12 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdha8Q91Y12 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Pcdha8Q91Y12 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdha8Q91Y12 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdha8Q91Y12 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdha8Q91Y12 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Pcdha8Q91Y12 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdha8Q91Y12 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdha8Q91Y12 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdha8Q91Y12 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdha8Q91Y12 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdha8Q91Y12 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdha8Q91Y12 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdha8Q91Y12 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms