Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb6Q91XZ4 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb6Q91XZ4 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb6Q91XZ4 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb6Q91XZ4 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb6Q91XZ4 Cog3-203ENSMUST00000227473 4197 ntBASIC12.29□□□□□ -0.44
Pcdhb6Q91XZ4 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb6Q91XZ4 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb6Q91XZ4 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhb6Q91XZ4 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb6Q91XZ4 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.29□□□□□ -0.44
Pcdhb6Q91XZ4 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhb6Q91XZ4 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.29□□□□□ -0.44
Pcdhb6Q91XZ4 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.29□□□□□ -0.44
Pcdhb6Q91XZ4 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.29□□□□□ -0.44
Pcdhb6Q91XZ4 Gm19287-201ENSMUST00000203190 358 ntBASIC12.29□□□□□ -0.44
Pcdhb6Q91XZ4 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb6Q91XZ4 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb6Q91XZ4 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb6Q91XZ4 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb6Q91XZ4 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb6Q91XZ4 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb6Q91XZ4 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhb6Q91XZ4 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdhb6Q91XZ4 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb6Q91XZ4 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb6Q91XZ4 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb6Q91XZ4 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.29□□□□□ -0.44
Pcdhb6Q91XZ4 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb6Q91XZ4 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.29□□□□□ -0.44
Pcdhb6Q91XZ4 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb6Q91XZ4 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhb6Q91XZ4 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb6Q91XZ4 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb6Q91XZ4 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Gm22133-201ENSMUST00000102082 109 ntBASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Gm13996-201ENSMUST00000118456 430 ntBASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb6Q91XZ4 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.27□□□□□ -0.44
Pcdhb6Q91XZ4 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhb6Q91XZ4 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhb6Q91XZ4 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhb6Q91XZ4 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhb6Q91XZ4 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhb6Q91XZ4 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhb6Q91XZ4 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhb6Q91XZ4 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb6Q91XZ4 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb6Q91XZ4 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Pcdhb6Q91XZ4 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Pcdhb6Q91XZ4 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 108 ms