Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim60Q8VI40 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim60Q8VI40 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim60Q8VI40 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim60Q8VI40 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim60Q8VI40 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.38□□□□□ -0.43
Trim60Q8VI40 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim60Q8VI40 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim60Q8VI40 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim60Q8VI40 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim60Q8VI40 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim60Q8VI40 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim60Q8VI40 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim60Q8VI40 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim60Q8VI40 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim60Q8VI40 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim60Q8VI40 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim60Q8VI40 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trim60Q8VI40 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.37□□□□□ -0.43
Trim60Q8VI40 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.37□□□□□ -0.43
Trim60Q8VI40 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim60Q8VI40 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim60Q8VI40 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim60Q8VI40 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim60Q8VI40 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim60Q8VI40 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim60Q8VI40 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim60Q8VI40 Gm14832-201ENSMUST00000121289 322 ntBASIC12.37□□□□□ -0.43
Trim60Q8VI40 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.37□□□□□ -0.43
Trim60Q8VI40 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.37□□□□□ -0.43
Trim60Q8VI40 Mospd4-201ENSMUST00000180618 576 ntBASIC12.37□□□□□ -0.43
Trim60Q8VI40 Gm27514-201ENSMUST00000183692 110 ntBASIC12.37□□□□□ -0.43
Trim60Q8VI40 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.37□□□□□ -0.43
Trim60Q8VI40 Gm5370-201ENSMUST00000187187 574 ntBASIC12.37□□□□□ -0.43
Trim60Q8VI40 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim60Q8VI40 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.37□□□□□ -0.43
Trim60Q8VI40 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.37□□□□□ -0.43
Trim60Q8VI40 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim60Q8VI40 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim60Q8VI40 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim60Q8VI40 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim60Q8VI40 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim60Q8VI40 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trim60Q8VI40 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trim60Q8VI40 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trim60Q8VI40 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.37□□□□□ -0.43
Trim60Q8VI40 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.37□□□□□ -0.43
Trim60Q8VI40 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim60Q8VI40 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trim60Q8VI40 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Trim60Q8VI40 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Trim60Q8VI40 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trim60Q8VI40 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim60Q8VI40 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim60Q8VI40 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim60Q8VI40 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim60Q8VI40 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim60Q8VI40 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim60Q8VI40 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.36□□□□□ -0.43
Trim60Q8VI40 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim60Q8VI40 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim60Q8VI40 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim60Q8VI40 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim60Q8VI40 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim60Q8VI40 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim60Q8VI40 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim60Q8VI40 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim60Q8VI40 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.36□□□□□ -0.43
Trim60Q8VI40 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim60Q8VI40 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.36□□□□□ -0.43
Trim60Q8VI40 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim60Q8VI40 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim60Q8VI40 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim60Q8VI40 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim60Q8VI40 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim60Q8VI40 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim60Q8VI40 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim60Q8VI40 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim60Q8VI40 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim60Q8VI40 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim60Q8VI40 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim60Q8VI40 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.36□□□□□ -0.43
Trim60Q8VI40 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim60Q8VI40 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim60Q8VI40 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim60Q8VI40 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim60Q8VI40 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim60Q8VI40 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim60Q8VI40 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trim60Q8VI40 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.35□□□□□ -0.43
Trim60Q8VI40 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim60Q8VI40 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim60Q8VI40 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trim60Q8VI40 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim60Q8VI40 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim60Q8VI40 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim60Q8VI40 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim60Q8VI40 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
Trim60Q8VI40 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim60Q8VI40 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms