Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Gm43947-201ENSMUST00000203019 959 ntBASIC10.96□□□□□ -0.65
Nkd2Q8VE28 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkd2Q8VE28 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nkd2Q8VE28 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.96□□□□□ -0.65
Nkd2Q8VE28 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.96□□□□□ -0.65
Nkd2Q8VE28 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.96□□□□□ -0.65
Nkd2Q8VE28 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkd2Q8VE28 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Nkd2Q8VE28 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkd2Q8VE28 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Nkd2Q8VE28 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkd2Q8VE28 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nkd2Q8VE28 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Nkd2Q8VE28 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkd2Q8VE28 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Nkd2Q8VE28 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Nkd2Q8VE28 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.96□□□□□ -0.66
Nkd2Q8VE28 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Nkd2Q8VE28 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkd2Q8VE28 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkd2Q8VE28 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Nkd2Q8VE28 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkd2Q8VE28 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Nkd2Q8VE28 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Gm14760-201ENSMUST00000121831 999 ntBASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Gm25732-201ENSMUST00000175168 60 ntBASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkd2Q8VE28 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 226.9 ms