Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Gm44958-201ENSMUST00000203734 736 ntBASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf4Q8K4J2 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Gm7446-201ENSMUST00000221035 1240 ntBASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ebf4Q8K4J2 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms