Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.29□□□□□ -0.6
Rfwd3Q8CIK8 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.29□□□□□ -0.6
Rfwd3Q8CIK8 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.29□□□□□ -0.6
Rfwd3Q8CIK8 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rfwd3Q8CIK8 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.29□□□□□ -0.6
Rfwd3Q8CIK8 Gm4857-201ENSMUST00000192718 785 ntBASIC11.29□□□□□ -0.6
Rfwd3Q8CIK8 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.29□□□□□ -0.6
Rfwd3Q8CIK8 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rfwd3Q8CIK8 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rfwd3Q8CIK8 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rfwd3Q8CIK8 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rfwd3Q8CIK8 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Rfwd3Q8CIK8 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.29□□□□□ -0.6
Rfwd3Q8CIK8 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rfwd3Q8CIK8 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rfwd3Q8CIK8 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rfwd3Q8CIK8 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rfwd3Q8CIK8 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rfwd3Q8CIK8 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rfwd3Q8CIK8 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rfwd3Q8CIK8 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.29□□□□□ -0.6
Rfwd3Q8CIK8 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rfwd3Q8CIK8 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rfwd3Q8CIK8 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rfwd3Q8CIK8 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rfwd3Q8CIK8 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Gm11989-201ENSMUST00000117240 672 ntBASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Gm13296-201ENSMUST00000117854 997 ntBASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Gm11362-201ENSMUST00000118838 850 ntBASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Gm35960-201ENSMUST00000202712 767 ntBASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rfwd3Q8CIK8 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Rfwd3Q8CIK8 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Rfwd3Q8CIK8 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rfwd3Q8CIK8 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rfwd3Q8CIK8 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.27□□□□□ -0.6
Rfwd3Q8CIK8 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rfwd3Q8CIK8 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rfwd3Q8CIK8 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rfwd3Q8CIK8 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rfwd3Q8CIK8 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Rfwd3Q8CIK8 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rfwd3Q8CIK8 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Rfwd3Q8CIK8 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rfwd3Q8CIK8 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rfwd3Q8CIK8 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rfwd3Q8CIK8 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rfwd3Q8CIK8 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rfwd3Q8CIK8 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rfwd3Q8CIK8 Gm14247-201ENSMUST00000120950 237 ntBASIC11.27□□□□□ -0.61
Rfwd3Q8CIK8 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rfwd3Q8CIK8 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rfwd3Q8CIK8 Gm26361-201ENSMUST00000158868 186 ntBASIC11.27□□□□□ -0.61
Rfwd3Q8CIK8 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rfwd3Q8CIK8 Gm25700-201ENSMUST00000177693 110 ntBASIC11.27□□□□□ -0.61
Rfwd3Q8CIK8 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.27□□□□□ -0.61
Rfwd3Q8CIK8 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.27□□□□□ -0.61
Rfwd3Q8CIK8 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.27□□□□□ -0.61
Rfwd3Q8CIK8 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 102.5 ms