Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.66□□□□□ -0.7
ShfQ8CG80 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC10.66□□□□□ -0.7
ShfQ8CG80 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ShfQ8CG80 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.66□□□□□ -0.7
ShfQ8CG80 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
ShfQ8CG80 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ShfQ8CG80 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ShfQ8CG80 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
ShfQ8CG80 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
ShfQ8CG80 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ShfQ8CG80 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ShfQ8CG80 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
ShfQ8CG80 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ShfQ8CG80 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ShfQ8CG80 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
ShfQ8CG80 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ShfQ8CG80 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.65□□□□□ -0.7
ShfQ8CG80 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.65□□□□□ -0.7
ShfQ8CG80 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ShfQ8CG80 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ShfQ8CG80 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ShfQ8CG80 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ShfQ8CG80 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
ShfQ8CG80 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
ShfQ8CG80 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.65□□□□□ -0.7
ShfQ8CG80 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ShfQ8CG80 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ShfQ8CG80 Gm23931-201ENSMUST00000103842 109 ntBASIC10.65□□□□□ -0.7
ShfQ8CG80 Gm25214-201ENSMUST00000104573 129 ntBASIC10.65□□□□□ -0.7
ShfQ8CG80 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
ShfQ8CG80 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.65□□□□□ -0.7
ShfQ8CG80 Snora78-201ENSMUST00000158630 128 ntBASIC10.65□□□□□ -0.7
ShfQ8CG80 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
ShfQ8CG80 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
ShfQ8CG80 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.65□□□□□ -0.7
ShfQ8CG80 Gm9192-201ENSMUST00000183221 985 ntBASIC10.65□□□□□ -0.7
ShfQ8CG80 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
ShfQ8CG80 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
ShfQ8CG80 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.65□□□□□ -0.7
ShfQ8CG80 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.65□□□□□ -0.7
ShfQ8CG80 Gm43118-201ENSMUST00000199149 775 ntBASIC10.65□□□□□ -0.7
ShfQ8CG80 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.65□□□□□ -0.7
ShfQ8CG80 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ShfQ8CG80 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
ShfQ8CG80 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
ShfQ8CG80 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.65□□□□□ -0.7
ShfQ8CG80 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ShfQ8CG80 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ShfQ8CG80 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.65□□□□□ -0.7
ShfQ8CG80 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ShfQ8CG80 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.65□□□□□ -0.7
ShfQ8CG80 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ShfQ8CG80 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
ShfQ8CG80 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.65□□□□□ -0.7
ShfQ8CG80 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
ShfQ8CG80 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
ShfQ8CG80 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ShfQ8CG80 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ShfQ8CG80 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
ShfQ8CG80 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ShfQ8CG80 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
ShfQ8CG80 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.65□□□□□ -0.71
ShfQ8CG80 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.65□□□□□ -0.71
ShfQ8CG80 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
ShfQ8CG80 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
ShfQ8CG80 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
ShfQ8CG80 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
ShfQ8CG80 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
ShfQ8CG80 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
ShfQ8CG80 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
ShfQ8CG80 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.64□□□□□ -0.71
ShfQ8CG80 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
ShfQ8CG80 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
ShfQ8CG80 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.64□□□□□ -0.71
ShfQ8CG80 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
ShfQ8CG80 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
ShfQ8CG80 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.64□□□□□ -0.71
ShfQ8CG80 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.64□□□□□ -0.71
ShfQ8CG80 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
ShfQ8CG80 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
ShfQ8CG80 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
ShfQ8CG80 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
ShfQ8CG80 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
ShfQ8CG80 Gm14644-201ENSMUST00000116671 647 ntBASIC10.64□□□□□ -0.71
ShfQ8CG80 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.64□□□□□ -0.71
ShfQ8CG80 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
ShfQ8CG80 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
ShfQ8CG80 Gm38314-201ENSMUST00000195709 625 ntBASIC10.64□□□□□ -0.71
ShfQ8CG80 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
ShfQ8CG80 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.64□□□□□ -0.71
ShfQ8CG80 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.64□□□□□ -0.71
ShfQ8CG80 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
ShfQ8CG80 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
ShfQ8CG80 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
ShfQ8CG80 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
ShfQ8CG80 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
ShfQ8CG80 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
ShfQ8CG80 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
ShfQ8CG80 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
ShfQ8CG80 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms