Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 Gm7029-201ENSMUST00000173226 450 ntBASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 Gm27437-201ENSMUST00000183429 107 ntBASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 Gm29705-201ENSMUST00000212598 474 ntBASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Ccdc28bQ8CEG5 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Ccdc28bQ8CEG5 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Gm22331-201ENSMUST00000158066 136 ntBASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.83□□□□□ -0.52
Ccdc28bQ8CEG5 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 Mir1894-201ENSMUST00000122802 81 ntBASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms