Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc17Q8CE13 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.5□□□□□ -0.41
Ccdc17Q8CE13 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccdc17Q8CE13 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccdc17Q8CE13 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc17Q8CE13 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.5□□□□□ -0.41
Ccdc17Q8CE13 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.5□□□□□ -0.41
Ccdc17Q8CE13 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc17Q8CE13 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccdc17Q8CE13 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc17Q8CE13 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc17Q8CE13 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc17Q8CE13 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ccdc17Q8CE13 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.5□□□□□ -0.41
Ccdc17Q8CE13 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Matn2-203ENSMUST00000226766 3252 ntBASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Gm3332-201ENSMUST00000189337 928 ntBASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Gm43184-201ENSMUST00000197247 542 ntBASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Gm4482-201ENSMUST00000200876 742 ntBASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Gm10752-201ENSMUST00000218348 729 ntBASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Gm5455-201ENSMUST00000058710 715 ntBASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc17Q8CE13 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 Gm44958-201ENSMUST00000203734 736 ntBASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 Gm4607-201ENSMUST00000206649 577 ntBASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 Gm10288-201ENSMUST00000084614 537 ntBASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms